Streptomyces xanthophaeus: KPP03845_101872
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Entry
KPP03845_101872 CDS
T08962
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sxt03051
]
KPP03845_101872 (pafA)
Enzymes [BR:
sxt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
KPP03845_101872 (pafA)
Proteasome [BR:
sxt03051
]
Prokaryotic proteasome
Bacterial regulatory particles
KPP03845_101872 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
WCD85538
LinkDB
All DBs
Position
complement(2004895..2006256)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEIQREYYDKAVDFAERRGIRTGVV
DQVLELWGRTLDAIDAEDLDRIGTEIDWVMKYQLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtctcctgacgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctctacctcgacgtgggttcg
catccggaatatgcaacaccggaatgcgacaacgtgacggaactcgtcacgcacgacaag
gccggcgagcgcattctcgaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgactctgcgggaaactcgtac
ggatgccacgagaactatctggtggcccggcacggggaattctcccgcctggcggacatc
ctcatcccgttcctcgtcacgcgccagctgatctgtggtgcgggcaaggtgctgcagacc
ccccggggtgcggtctactgcgtgagccagcgggccgagcacatctgggaaggcgtcagt
tccgcgacgacccggtcccggccgatcatcaacaccagggacgagccgcacgcggacgcg
gagcggtaccggcggctccacgtcatcgtcggtgactcgaacatgtccgagacgaccatg
ctgctgaaggtcggggccaccgatctcgtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgacgctggagaacccgatccgggcgatccgtgaggtcagtcacgacatcacc
ggccagcgcaaggtgcgtctggcgagcggccgggaggcctcggcgctggagatccagcgg
gagtactacgacaaggcggtggacttcgcggagcgccgggggatccgtaccggtgtggtg
gaccaggtgctggagctgtggggccgcacgctcgacgccatcgacgccgaggacctggac
cggatcgggaccgagatcgactgggtcatgaagtaccagctgatcgagcggtaccgggcc
aagcacaacatgacgatgtcgaacccgcgggtggctcagatagacctcgcctaccacgac
atccaccgccggcgcgggctgtactacctgctggagcgcaaggggcaggcggcgcggatc
tgcaacgacctcaagatcttcgagggcaagtcggtgcccccgcagacgacgagggcgcgg
ctgcgcggtgacttcatccgccgggcgcaggagcagcggcgggacttcacggtggactgg
gtgcacctgaagctgaacgaccaggcgcagcggaccgtgctgtgcaaggacccgttccgg
tcggtggacgaccgggtggagaagctgatcgccgggatgtga
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