Streptomyces xanthophaeus: KPP03845_102004
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Entry
KPP03845_102004 CDS
T08962
Name
(GenBank) putative RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxt03009
]
KPP03845_102004
Enzymes [BR:
sxt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
KPP03845_102004
Ribosome biogenesis [BR:
sxt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KPP03845_102004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
ThiS
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WCD85669
LinkDB
All DBs
Position
complement(2154963..2156396)
Genome browser
AA seq
477 aa
AA seq
DB search
MRSSGNGNGGGNRNSSGGGGRGNARGGSSGGGGYRGGGSGGGSGSGGGGGYRGSGGGSSS
GGGARGGSGGGARGGSSGGYRSTGSGSGSGGGYRSGGGSSSGGGYQGGGYQGGSDSRDRE
QAPRIRNPRPEERRYDVGPEGERNGRGGAKAGGGGARGAADGNRGGARGDAARGGAKGGP
RTPKTPGIGGAGGPRRGPGSRSGQSRPRELDARIEERVRDRYADKPVIKTPKTFPGAEEE
GERLQKVLARAGMGSRRACEELIEQARVEVNGEIVLEQGKRVQPKDEIKVDGLTVATQSY
LFFALNKPAGVVSTMEDPDGRQCLGDYVTNRETRLFHVGRLDTETEGIILLTNHGELAHR
LTHPKYGVKKTYVAAITGPLPREIGKRLKDGIELEDGYARADHFRVVDQVGKNYLVEVTL
HEGRKHIVRRMMAEAGFPVEKLVRTSFGPIELGDQKSGWLRRLTNTEVGMLMREVGL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcggcaacggcaacggtggcggcaacaggaacagcagcggcggcggcggg
cgcggtaacgcccgcggcggcagctccggcggcggtggttaccgcggcggcggctccggc
ggtggcagcggctccggcggcggcggtggctaccgcggctccggcggcggcagctccagc
ggcggcggcgcccgtggcggctccggcggcggcgcccgcggcggcagctccggcggctac
cgcagcaccggcagtggcagcggctccggcggcggctaccgcagcggcggtggcagcagc
tccggcggcggctaccagggcggcggctaccagggcggctccgactcgcgtgaccgcgag
caggccccccgcatccgcaacccgcgccccgaggagcgccgctacgacgtgggccccgag
ggcgagcgcaacggccgcggcggagccaaggcgggcggcggcggtgcccgcggcgcggcc
gacggcaaccggggcggtgcccgcggcgacgcggcccgcggcggtgccaagggcggcccc
aggacccccaagacccccggcatcggcggggccggcggcccgcgccgcggccccggcagc
cgcagcggccagtcccgtccccgcgagctggacgcgcggatcgaggagcgcgtgcgcgac
cggtacgccgacaagcccgtgatcaagaccccgaagaccttcccgggcgccgaggaggag
ggtgagcgcctgcagaaggtgctcgcccgggccggcatgggttcgcgccgcgcgtgcgag
gagctcatcgagcaggcccgcgtcgaggtcaacggcgagatcgtgctggagcagggcaag
cgcgtccagccgaaggacgagatcaaggtggacggtctgaccgtcgccacccagtcgtac
ctcttcttcgcgctgaacaagcccgccggtgtcgtctccaccatggaggacccggacggc
cgccagtgcctcggcgactacgtcaccaaccgtgagacgcgtctcttccacgtcggccgg
ctcgacaccgagaccgagggcatcatcctgctcaccaaccacggtgagctggcgcaccgc
ctcacgcacccgaagtacggcgtgaagaagacctacgtcgcggccatcaccggcccgctg
ccgcgcgagatcggcaagcggctcaaggacggcatcgagctggaggacgggtacgcccgc
gccgaccacttccgcgtcgtcgaccaggtcggcaagaactacctggtcgaggtcaccctc
cacgagggccgcaagcacatcgtccgccgcatgatggcggaggcgggcttccccgtcgag
aagctcgtccggacctccttcggtccgatcgagctgggcgaccagaagtccggctggctg
cgccgcctgaccaacaccgaggtcggcatgctcatgcgcgaggtcggtctgtag
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integrated database retrieval system
