Streptomyces xanthophaeus: KPP03845_102297
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Entry
KPP03845_102297 CDS
T08962
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sxt
Streptomyces xanthophaeus
Pathway
sxt03030
DNA replication
sxt03430
Mismatch repair
sxt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPP03845_102297 (dnaE1)
03430 Mismatch repair
KPP03845_102297 (dnaE1)
03440 Homologous recombination
KPP03845_102297 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxt03032
]
KPP03845_102297 (dnaE1)
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_102297 (dnaE1)
Enzymes [BR:
sxt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPP03845_102297 (dnaE1)
DNA replication proteins [BR:
sxt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KPP03845_102297 (dnaE1)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KPP03845_102297 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WCD85956
LinkDB
All DBs
Position
complement(2471924..2475466)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAQKS
GITPIIGIEAYVAPESRRNKRRIQWGQPHQKRDDVSGSGGYTHKTIWASNATGLHNLFRL
SSDAYAEGWLTKWPRMDKETISKWSEGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYASEAGAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTKLVADQIDTEGMFKFRN
LMPKFDIPDGHTEVSWFREETMRGMHRRYPGGIPDDRMKQAEYEMDTIISMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPLTHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGQDKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPAHPRYGEAGEIRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRHTDQVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLALPLDDPKTFELLGRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPELEGPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVIFEEGAKKKGFSDQAIKALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANFPAEYMAGLLTSVKDDKDKSAIYLNECRRMGIKVLPPNVNES
EPNFAAQGDDVILFGLTAVRNVGSNVVESIIKTRKAKGKYSTFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVAVKRKEAEGQFDLFGGMGDEGASDEPGFG
LDVEFSDVEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKTDAGISQLTGGEHSDGAV
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGR
LDKREDVPRLVAMEMMVPDLSSAGTNAPVVLTIPTVKVTPPMVTRLGEILRHHKGNTEVR
IKLQGPRTTTVLRLDRHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcctacgacttcttccacaccgcccagaagtcg
gggatcacgccgatcatcggcatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cggcgcatccagtggggccagccccaccagaagcgggacgacgtctccggttccggtggt
tacacccacaagacgatctgggcgtcgaacgccaccggcctgcacaacctcttccggctg
tcctccgacgcctacgccgagggctggctcacgaagtggccccgcatggacaaggagacg
atctccaagtggtccgaggggctcatcgcctccaccggctgcccctccggagagctccag
accaggctgcgcctcggccagttcgacgaggccctgaagtcggcctccgagtaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctcctggagatcggcaagaagctcggcatcccgccgctggtcacg
aacgactcgcactacacctacgccagcgaggccggcgcccacgacgccctgctctgcatc
cagaccggcaagaacctctcggacccggaccgcttccgcttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgaagctggtcgcggaccagatcgacaccgagggcatgttcaagttccggaac
ctgatgccgaagttcgacatcccggacggccacaccgaggtcagctggttccgcgaggag
accatgcgtggcatgcaccgccgctacccgggaggcatcccggacgaccggatgaagcag
gccgagtacgagatggacacgatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtgggccccggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgctcacccac
ggcctgatcttcgagcgcttcctgaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtgaccgagaagtacggccag
gacaaggtggccatgatcggcacctacggcaccatcaaggccaagaacgccatcaaggac
tcggcgcgcgtcctgggctacccctacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtgctcggcaagggcatcccgctctccggcatcctcgaccccgcgcacccgcgc
tacggcgaggccggcgagatccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgcccgcggtgtggagggcctggtgcgccagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagacgatcaccgaccacgtaccggtctgggtgcgccacacggac
caggtgaccatcacccagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaaggggatcgacatcgatctcctggccctcccgctcgacgaccccaagaccttcgaa
ctgctcggccgcggtgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcctgatgaagcccgacaacttcgaggacatctccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacacgaactacgccctgcgcaagaacaagcag
caggagatcaccccgatccacccggagctggagggacccctcgaagaggtgctcgcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggag
ctggcgaagaacttcgtcatcttcgaggagggcgccaagaagaagggcttcagcgaccag
gcgatcaaggccctgtgggacgtgctggtccccttcgccggctacgccttcaacaaggcc
cactcggccgcgtacggactggtctcctactggaccgcctacctcaaggcgaacttcccc
gccgagtacatggcgggactcctcacctcggtcaaggacgacaaggacaagtccgcgatc
tacctgaacgagtgccggcgcatggggatcaaggtcctgccgccgaacgtgaacgagtcg
gagccgaacttcgccgcccagggcgacgacgtgatcctcttcggcctcaccgccgtgcgc
aacgtcggcagcaacgtcgtcgagtcgatcatcaagaccaggaaggcgaaggggaagtac
tccaccttccccgacttcctggacaaggtcgaggccgtcgtctgcaacaagcgcaccgtc
gagtccctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggtctggtc
gcccaccacgagccgatgatcgacaacgtggtcgccgtgaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgacgagggcgcgagcgacgagcccggcttcggg
ctcgacgtggagttctccgacgtggagtgggagaagtcctacctgctcgcccaggagcgc
gagatgctcggcctctacgtctccgaccacccgctcttcggcctggagcacgtgctgtcc
gacaagacggacgccgggatctcccagctcaccggcggcgagcactccgacggagccgtc
gtcaccatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcc
tgggccatcgccacggtggaggacctggccggctccatcgaatgcatgttcttccccgcg
acctaccagctcgtctccacccagctggtcgaggacaccgtcgtcttcgtcaagggccgc
ctcgacaagcgcgaggacgtgccccggctggtcgccatggagatgatggtccccgacctc
tcctcggccggcaccaacgcacccgtcgtcctcaccatccccaccgtcaaggtcaccccg
ccgatggtgacccggctgggggagatcctgcgccaccacaagggcaacaccgaggtgcgg
atcaagctccagggcccgcggaccaccaccgtgctgcgcctggaccggcaccgcgtacag
cccgacccggcgctcttcggcgacctgaaggtgctgctcggcccgtcctgcctcgccggg
tag
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integrated database retrieval system
