Streptomyces xanthophaeus: KPP03845_103005
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Entry
KPP03845_103005 CDS
T08962
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_103005 (vsr)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KPP03845_103005 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
WCD86650
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All DBs
Position
3258310..3258711
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AA seq
133 aa
AA seq
DB search
MQAIRSRDTKPEQLVRRLLHARGLRYRVDARPLPGLRRTADIVFRPAKVAVFIDGCYWHG
CPDHYVAPKTNPGYWSDKVARNMSRDQDTNERLREAGWAVLRFWEHEPSGECALRIAAEV
EKRRTRVQGRGTA
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgatccgaagccgcgacaccaagccggagcagctcgtacggcgtctgctccat
gcacgcggactgcgctaccgcgtggacgcgcggccgcttcccggacttcgccgtacagcg
gacatcgtgttccgtccggcgaaggtggccgtcttcatcgacggctgttactggcacggt
tgccccgaccactacgtggcgccgaagacgaaccccggctactggtcggacaaggtggcc
cggaacatgtcccgggaccaggacaccaacgaacgcctgcgcgaggcggggtgggctgtg
ctccgcttctgggaacacgaaccctcgggcgagtgtgccctgcggatcgctgcagaagtc
gagaagcgccgtacccgtgtgcagggtaggggtacggcctga
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