Streptomyces xanthophaeus: KPP03845_103568
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Entry
KPP03845_103568 CDS
T08962
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxt03032
]
KPP03845_103568 (topA)
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_103568 (topA)
Enzymes [BR:
sxt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KPP03845_103568 (topA)
DNA replication proteins [BR:
sxt03032
]
Prokaryotic type
DNA Topoisomerases
KPP03845_103568 (topA)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KPP03845_103568 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WCD87194
LinkDB
All DBs
Position
complement(3902869..3905682)
Genome browser
AA seq
937 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDKYTGE
VRRLGVDVEHDFAPIYVVNADKKAQVRKLKELLAESDELFLATDEDREGEAIAWHLQEVL
KPKVPVHRMVFHEITKDAIRDAVANPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFSTGRAGDASDPSTLVARLNTVD
GKRVAQGRDFGSTGQLKSEVLHLDEANARALAAALEGASFAVRSVESKPYRRSPYAPFRT
TTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSETAVTAARAQVTQLYGAD
YLPEKPRVYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMKD
AVGNSVTVKIGGRAADGRDAEFSASGKTITFHGFMKAYVEGADDPNAELDDREKRLPQVA
EGDALAAEEITADGHSTKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKKG
TALVPSFLSFAVVNLLETHFGRLVDYDFTAKMEDDLDRIARGEAQSVPWLKRFYFGSEDA
TEVVPADGDHLGGLKELVTDLGAIDAREISSFPVGDGVVLRVGRYGPYVERGEKDSEGHQ
RADVPDDMAPDELTVAYAEELFAKPSGEFALGKDPVSGNEIVAKDGRYGPYVTEILPEGT
PKTGKNAVKPRTASLFQSMSLDTVTLDEALKLMSLPRVVGADAEGVEITAQNGRYGPYLK
KGTDSRSLETEDQLFSITLDEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKPVVVKDGR
FGPYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAKKTAKKAPAKKAPAKKATA
TKTAAAKKTTAAKKTTAKKTVAKKTTAKKAVAAPADE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgactagcgagaccgcaaagggcggccgccgactcgtcatcgtcgagtcccct
gccaaggcgaagacgatcaagggctacctcggccccggatacgtcgtcgaggcgagcgtc
gggcacatccgcgacctcccgaacggcgcggccgaggtccccgacaagtacaccggcgag
gtccgccgtctcggcgtggacgtcgagcacgacttcgcgccgatctacgtggtgaacgcc
gacaagaaggcccaggtccgcaagctcaaggagctgctggccgagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaagccatcgcgtggcacctgcaggaagtcctc
aagcccaaggtccccgtccaccggatggtcttccacgagatcaccaaggacgcgatccgc
gacgccgtcgccaacccgcgcgagctcaaccagcgcatggtcgacgcccaggagacccgc
cgcatcctcgaccgcctgtacggctacgaggtgtcgccggtcctgtggaagaaggtcatg
ccgcggctgtccgccgggcgcgtccagtcggtggccacccgcctcgtcgtcgagcgggag
cgcgagcgcatcgccttccgcagcgccgagtactgggacctgaccggaaccttctccacc
ggccgcgccggtgacgcctccgacccgtccacgctggtcgcccgcctgaacacggtggac
ggcaagcgcgtcgcacagggccgtgacttcggttcgaccgggcagctcaagagcgaggtg
ctgcacctcgacgaggcgaacgcgcgggccctggccgccgcgctcgaaggcgcgtccttc
gcggtccggtcggtcgagtccaagccgtaccgccgctccccgtacgccccgttccgcacg
acgacgctccagcaggaggcctcgcgcaagctcggcttcggtgcgaaggcgaccatgcag
gtggcccagaagctgtacgagaacggcttcatcacctatatgcgtacggactccacgacc
ctgtccgagaccgccgtgacggcggcccgggcgcaggtcacgcagctgtacggcgccgac
tacctgccggagaagccgcgcgtctacgcgggcaaggtcaagaacgcccaggaggcgcac
gaggcgatccgcccctcgggtgatcgtttccgcaccccggccgagaccgggctgaccggc
gaccagttccgtctctacgagctgatctggaagcggaccgtcgcctcccagatgaaggac
gcggtcggcaactccgtcaccgtgaagatcggcgggcgtgccgcggacggccgggacgcg
gaattctccgcctccggcaagacgatcaccttccacggcttcatgaaggcctacgtcgag
ggcgcggacgacccgaacgcggagctcgacgaccgcgagaagcgcctgccgcaggtcgcg
gagggcgacgcgctcgccgccgaggagatcacggcggacggccactcgaccaagccgccg
gcccgctacaccgaggcctcgctggtcaaggagctcgaagagcgcgagatcggccgtccg
tcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctacgtcttcaagaagggc
acggcgctcgtgccgtccttcctgtcgttcgccgtggtcaacctgctggagacgcacttc
ggccggctcgtcgactacgacttcaccgcgaagatggaggacgacctcgaccgcatcgcg
cggggcgaggcccagtccgtgccgtggctgaagcgcttctacttcggctcggaggacgcc
accgaggtcgtaccggccgacggcgaccacctcggcggtctgaaggagctggtcacggac
ctgggcgcgatcgacgcccgggagatctcctccttcccggtcggcgacggcgtcgtcctg
cgcgtcggccgctacgggccgtacgtggagcgcggcgagaaggactccgagggccaccag
cgggccgacgtgcccgacgacatggctccggacgagctgacggtcgcctacgcggaggaa
ctgttcgcgaagccgagcggcgagttcgcgctcggcaaggaccccgtcagcgggaacgag
atcgtcgcgaaggacggccgctacggcccctacgtcaccgagatcctccccgagggcacc
ccgaagacgggcaagaacgcggtcaagccgcggacggcctcgctcttccagtcgatgagc
ctcgacacggtcaccctcgacgaagcgctcaagctgatgtcgctgccgcgcgtggtcggc
gccgacgcggagggcgtggagatcacggcccagaacggccgctacggcccgtacctgaag
aagggcacggactcgcggtccctggagaccgaggaccagctcttctcgatcacgctggac
gaggccctggcgatctacgcgcagcccaagcagcgcggccgggccgcggccaagccgccg
ctgaaggagctgggcaccgacccggtcagcgagaagccggtggtggtcaaggacggccgc
ttcgggccgtacgtgacggacggcgagacgaacgcgacgctgcggcgggacgacgacgtc
gagacgatcacgcccgagcgcggctacgagctgctcgcggagaagcgtgcgaagggcccg
gccaagaagacggcgaagaaggccccggccaagaaggccccggcgaagaaggcgacggcg
acgaagaccgccgccgcgaagaagacgacggcggccaagaagacgaccgccaagaagacg
gtggcgaagaagaccaccgccaagaaggcggtcgccgcccccgcggacgagtag
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