Streptomyces xanthophaeus: KPP03845_103997
Help
Entry
KPP03845_103997 CDS
T08962
Symbol
sigF_5
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxt03021
]
KPP03845_103997 (sigF_5)
Transcription machinery [BR:
sxt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KPP03845_103997 (sigF_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WCD87613
LinkDB
All DBs
Position
complement(4370835..4371683)
Genome browser
AA seq
282 aa
AA seq
DB search
MSVDQGSSKVLTLVKSPAPAAPAAPVRSEAIDTRTLSRSLFQRLAALDADSPERAYVRDT
LIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGE
IKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELAAVLGVSEEDVVDGL
AVGNAYTASSLDSPSPEDEGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQII
MLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRVGLIGE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaccagggcagctccaaggtgctcacgctcgtcaagagcccggctccggca
gcacctgcagcgcctgtccgctcggaagccatcgacacccgcaccctctcccgctccctc
ttccagcgacttgccgccctggacgcggacagccccgaacgggcgtacgtacgcgacacc
ctgatcgagctgaacctgccgctggtgcggtacgccgcagcccggttccgcagccgcaac
gagccgatggaagacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccgg
ttcgactgcgaacgcggcgtcgagttcccgacgttcgcgatgccgaccgtcgtgggcgag
atcaaacgattctttagggacacctcctggtccgtgcgcgtcccgcgcaggctccaggag
ctgcgcctggcgctgaccaaggccagcgacgagctcgcccagaagctggaccgctcgccg
accgtccccgagctcgcggccgtgctcggcgtctcggaggaggacgtggtcgacgggctc
gccgtcggcaacgcctacaccgcctcctcgctcgactccccctccccggaggacgagggc
ggcgagggctcgctcgcggaccgtctcggctacgaggacaccgcgctggagggcgtcgag
taccgcgagtcgctcaagccgctgctcgccaaactcccgccccgggaacggcagatcatc
atgctgcggttcttcgcgaacatgacgcagtcccagatcggcgaggaggtcggcatctcc
cagatgcacgtctcccggctgctcacgcggacgctcgcccagctgcgcgtgggactcatc
ggggagtga
DBGET
integrated database retrieval system
