Streptomyces xanthophaeus: KPP03845_103998
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Entry
KPP03845_103998 CDS
T08962
Symbol
sigF_6
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sxt
Streptomyces xanthophaeus
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxt03021
]
KPP03845_103998 (sigF_6)
Transcription machinery [BR:
sxt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KPP03845_103998 (sigF_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
MarR
HTH_3
DUF134
DUF7343
HTH_37
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
WCD87614
LinkDB
All DBs
Position
complement(4371914..4372930)
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AA seq
338 aa
AA seq
DB search
MTVPASTAPQVPPQQDPQPYRPGLRPEVRQELRPEPRQELRQEPRREVLQEVRQEAGPEP
QQEPRQEPRQDPPEEPPPPAPRPAGRGADTRALTQVLFGQLKDLEPGTSEHSRVRGALIE
ANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKR
YFRDNVRTVHVPRRLHELWVQVNAATEDLTTLHGRTPTTPEIAERLRISEDEVLSCIEAG
RSYHATSLEAAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYY
NNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgccggccagtactgcgcctcaggtgccccctcagcaggacccccagccctac
cggccgggactccggcccgaagtccggcaggagctcaggccggaaccccggcaggagctc
cggcaggaaccccggcgggaggtcctgcaggaagtccggcaggaggccggccccgagccg
cagcaggaaccgcggcaggaaccccgccaggacccgcccgaggagccgccgccgcccgcc
ccccggcccgccggccggggcgccgacacccgggccctcacccaggtcctcttcggacag
ctgaaggacctggagccgggcaccagcgagcacagccgggtgcgcggcgccctgatcgag
gccaacctcccgctcgtccggtacgcggccgcccgtttccgcagccgcaacgagccgatg
gaggacgtggtccaggtcggcaccatcgggctcatcaacgccatcgaccgcttcgacccg
gaccgcggggtgcagttcccgaccttcgcgatgccgaccgtcgtgggcgagatcaagcgc
tacttccgggacaacgtccgcaccgtgcacgtaccgcgccgcctccacgagctgtgggtg
caggtcaacgcggccaccgaggacctgaccaccctgcacgggcgcaccccgaccaccccc
gagatcgcggagcggctgcggatcagcgaggacgaggtgctgtcctgcatcgaggccggg
cgctcgtaccacgcgacctcgctggaggccgcccaggagggcgacgggctgcccgggctg
ctggaccggctcggctacgaggaccccgagctggccggggtcgagcaccgggacctcgta
cgccacctgctcgtacaactgcccgagcgcgagcagcggatcctcctcctgcggtactac
aacaatctgacgcagtcgcagatcagcgcggagctcggcgtctcccagatgcacgtctcc
cggctgctcgcccggagcttcgcccgactgagatccgcaaacaggatcgaggcgtaa
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