Streptomyces xanthophaeus: KPP03845_104524
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Entry
KPP03845_104524 CDS
T08962
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sxt
Streptomyces xanthophaeus
Pathway
sxt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPP03845_104524 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxt03021
]
KPP03845_104524 (rpoA)
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_104524 (rpoA)
Enzymes [BR:
sxt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPP03845_104524 (rpoA)
Transcription machinery [BR:
sxt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPP03845_104524 (rpoA)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPP03845_104524 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WCD88119
LinkDB
All DBs
Position
4896548..4897570
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDIILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQLGQEIGRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccttcgctgaccgaagaggtcgtcgacgagtaccgctcgcgg
ttcgtgatcgagccgctcgagccgggcttcggttacaccctcggcaactccctgcgccgc
accctgctgtcctccatccccggtgccgctgtcaccagcatccgcgtggacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaagacgtcaccgacatcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgctgacatcgcgcccccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcagctgggccaggagatcggt
cgcatcccgatcgactccatctacagcccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggtaagaccctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccctcgccgacggac
gcggccctggccgccgacctggcgctgccgatcgaggagctcgagctcacggtccgctcg
tacaactgcctcaagcgcgagggcatccactccgtgggcgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctcgccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tag
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