Streptomyces xanthophaeus: KPP03845_104593
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Entry
KPP03845_104593 CDS
T08962
Symbol
uvrD1_2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sxt
Streptomyces xanthophaeus
Pathway
sxt03420
Nucleotide excision repair
sxt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KPP03845_104593 (uvrD1_2)
03430 Mismatch repair
KPP03845_104593 (uvrD1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_104593 (uvrD1_2)
Enzymes [BR:
sxt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPP03845_104593 (uvrD1_2)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPP03845_104593 (uvrD1_2)
MMR (mismatch excision repair)
Other MMR factors
KPP03845_104593 (uvrD1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
ResIII
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WCD88188
LinkDB
All DBs
Position
4973356..4975875
Genome browser
AA seq
839 aa
AA seq
DB search
MSSLFDDSFLADFTPSDEVPPPPEDHPAPEQGADDLFGGRFDVPMSGDAYYRDGAPRPVI
DPATLLEGLNAEQAAAVVHAGSPLLIVAGAGSGKTRVLTHRIGHLLSARNVHPGQILAIT
FTNKAAGEMKERVEGLVGPRANAMWVSTFHSACVRILRRESKRLGFTSSFSIYDAADSKR
LMALVCRDLDLDPKKFPPKAFNAKVSNLKNELIDEEAFADQAADGFEKTLAQAYAMYQGR
LREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGTG
YPDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYADATTILLEQNYRSTQTILSAAN
AVIERNENRRAKNLWTQAGTGAVITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVAIF
YRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDNVPLRRILNV
PKRGIGERAEAMVDALAMREKITFPQALRRVDEAFGMAARSTNAVKRFNVLMEELRTIVD
SGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQAREAATAEAAE
NGTPAPGPGTLAEFLEQVALVADSDQIPDEDQDGSGVITLMTLHTAKGLEFPVVFLTGME
DGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSMRSAWGTPSYNPPSRFLEEI
PAEYLQWKRTGAAQKPAGPMRSSGYGSGAGGGKTTFGTSPEAFLSSSRTKSGPSGFATRR
ATDKPVIALVVGDRVTHDQFGLGTVMEVKGAGADAQATIDFGDDKPKRLLLRYAPVQKL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctggcggacttcaccccctccgacgaggtcccc
ccgccgcccgaggaccaccccgccccggagcagggtgcggacgacctcttcgggggccgg
ttcgacgtgcccatgagcggggacgcgtactaccgcgacggcgccccccggcccgtcatc
gacccggcgacgctcctcgaaggactgaatgcggagcaggccgcagccgtggtgcacgcg
ggctcgcccctgctcatcgtggccggtgccggctccggcaagacccgggtgctcacccac
cgcatcggacacctgctgtccgcgcgcaacgtccaccccggccagatcctcgcgatcacc
ttcaccaacaaggccgccggtgagatgaaggagcgcgtggagggcctggtcggcccgcgc
gccaacgccatgtgggtgtccaccttccacagcgcgtgcgtacgcatcctgcgccgcgag
tccaagaggctcggcttcacctcctcgttctcgatctacgacgcggccgactcgaagcgc
ctgatggcgctcgtctgccgcgacctggacctggaccccaagaagttcccgcccaaggcc
ttcaacgccaaggtctcgaacctcaagaacgaactgatcgacgaggaagccttcgccgac
caggccgcggacgggttcgagaagaccctcgcccaggcgtacgcgatgtaccaggggcgg
ctgcgcgaggccaacgcgctcgacttcgacgacatcatcatgaccacggtccacctgctc
caggcgttcccggacgtcgccgagcactaccggcgccgcttccggcacgtcctggtcgac
gagtaccaggacaccaaccacgcccagtacacgctggtgcgcgagctcgtcggcaccggc
tacccggacctgcccccggccgagctgtgcgtggtgggtgacgccgaccagtcgatctac
gccttccgcggcgcgaccatccgcaacatcctccagttcgaagaggactacgcggacgcg
acgacgatcctgctggagcagaactaccgctccacgcagaccatcctctccgccgccaac
gcggtcatcgagcgcaacgagaaccgccgcgccaagaacctgtggacccaggccggcacc
ggcgccgtcatcaccgggtacgtcgcggacaccgagcacgacgaggcgcagttcgtcgcc
gacgagatcgaccggctcaccgacgccggcgacgccaaggccggcgatgtcgcgatcttc
taccggaccaacgcgcagtcccgtgtgttcgaggagatcttcatccgcgtcgggctgccc
tacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgcgacgtcctcgcg
tacctgcgcgtcctcgcgaaccccgaggacaacgtcccgctgcgccgcatcctgaacgtc
cccaagcgcggcatcggcgagcgcgccgaggccatggtcgacgccctcgcgatgcgcgag
aagatcactttcccgcaggcgctgcggcgcgtggacgaggccttcggcatggccgcccgc
tccacgaacgcggtgaagcggttcaacgtgctgatggaggagctgcgcacgatcgtcgac
tccggcgcgggccccgcggtcgtcctggaggcggtcctggagcgtacgggctacctggcc
gagctccaggcttccaccgacccgcaggacgagacgcggatcgagaacctccaggaactg
gccgcggtggcgctcgagttcgagcaggcgcgggaggccgcgacggccgaggccgccgag
aacggcaccccggcccccggccccggcacgctcgccgagttcctggagcaggtcgcgctc
gtcgccgactccgaccagatccccgacgaggaccaggacggctccggagtcatcacgctg
atgaccctgcacacggccaagggcctggagttccccgtggtcttcctgaccggcatggag
gacggggtcttcccgcacatgcgggcactgggccagaccaaggagctggaggaggagcgc
cgcctcgcctacgtcggcatcacgcgggcgcgcgagcggctgtacctgacccgctcctcg
atgcgcagcgcgtgggggacgccctcgtacaacccgccgtcgcggttcctggaggagatc
ccggcggagtacctccagtggaagcgcacgggcgccgcacagaagccggccggtccgatg
cgcagctccggctacggatccggtgcgggcggcggcaagacgaccttcggcacctcgccg
gaagcgttcctgtcctcgtcgcgcacgaagtcgggcccgtccggcttcgccacgcgccgg
gccaccgacaagccggtcatcgccctggtggtcggggaccgcgtcacgcacgaccagttc
gggctcggcacggtgatggaggtcaagggagcgggcgcggacgcgcaggccaccatcgac
ttcggggacgacaagccgaagcggctgctgctgcgctacgcgccggtgcagaagctgtag
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