Streptomyces xanthophaeus: KPP03845_104953
Help
Entry
KPP03845_104953 CDS
T08962
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sxt
Streptomyces xanthophaeus
Pathway
sxt03420
Nucleotide excision repair
sxt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KPP03845_104953 (pcrA_2)
03430 Mismatch repair
KPP03845_104953 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_104953 (pcrA_2)
Enzymes [BR:
sxt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPP03845_104953 (pcrA_2)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPP03845_104953 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
KPP03845_104953 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WCD88546
LinkDB
All DBs
Position
5364637..5368368
Genome browser
AA seq
1243 aa
AA seq
DB search
MRRRPGLSVGAASLLKVSARPSVLTDPEQLKELLGIPFTPEQTDCITAPPAPQVIVAGAG
SGKTTVMAARVVWLVGTGVVAPEQVLGLTFTNKAAGELAERVRKALARAGITDPDPSPAE
ADAAGGEPRISTYHAFAGQLLKDHGLRIGLEPSARLLADATRFQLAAKVLREAPGPYPSL
TKSVPDLVSDLLALDAELSEHLVEPAGLRAYDTELLHTLSGTKLTNEDLRKVPEAVRGRL
ELLELVGRYRAAKRSRDLLDFSDQIALSAQLATTRPEVGALLREEFKVVLLDEYQDTSVA
QRLLLSGLFGAGSGHAVTAVGDPCQAIYGWRGASVANLDDFPEHFPHADGTPATRQSLSE
NRRSGGRLLDLANGLAAPLRSLHEGVEALRPAPGAEGAGSVRCALLETHAEELEWLADSV
AHLVRTGTEPREIAVLCRSAGDFARIQAVLVARDVPVEVVGLSGLLHLPEVADLVAVCEV
LQDPGANASLVRLLIGPRWRIGARDLALLGRRARLLIGRSAGDAADADERLAAAVEGVDP
AEIVSLADALETFLDGGGQAPDDLPFSAEARVRFAHLAQELRDLRRSLADPLMDVLHRVL
SATGLEVELSASPHALAARRRETLSNFMDVAAGFAALDGEASLLAFLAFLRTAAQYEKGL
DHALPGGENTVKVLTAHKSKGLEWDVVVVPDLCAGAFPKEKAPEAWTSYAKVLPYALRGD
AATLPGDPAWTSAGLKSFKASLKEHKATEELRLGYVTFTRPRSLLLASGHWWGPTQKKRR
GPSAFLTALYEHCAAGAGEIEVWAEEPAPDAENPALSEDAAADHSWPLPLDPDSLALRRT
AAALVESYLAAPPPPEESAAGDYLWPPDCEDPSYEDEPWPDEEADPDAHAGPDAHAGPDA
YAGPDEDPAPAPAPVPAPRPEAATPPRSTAVPASDAGADPDADPWAAEPWAQPARRSGLP
HQGRGTAVPASDAGADPDADPWAAEPWAQPAPPRARAAAGPDPLTPEEARAIASWDRDLE
ALEGELRRARAAVRDVELPAALSASQLLRLAADEQGFARDLARPMPRPPQPAARQGTRFH
AWVESRFDELPLPLLDVLDPATELPGSDQEIVDEADLESLKAAFERSPYAERTPYRMEAP
VQLTLAGRVVRGRIDAVYKNPDGSYEIVDWKTGRTTEADPLQLAVYRLAWSEATGTPLEQ
VGAVFLHVRSGRVIRPRDLPDRARLERILQGKSGTGRAPRTEG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagacgccggccgggactgtcggtcggtgcggctagcctcttgaaggtgtccgcgcgt
ccgtccgtcctcaccgaccccgagcagctcaaggagctcctcggcatccccttcacgccc
gaacagacggactgcatcacggccccgcccgcccctcaggtcatcgtcgccggtgccggc
tcgggcaagaccaccgtcatggccgcccgggtggtctggctggtgggcaccggtgtggtc
gcgcccgagcaggtcctcggcctgaccttcaccaacaaggccgccggggagctcgccgag
cgcgtccgcaaggccctcgcgcgggccggcatcaccgacccggacccctccccggccgag
gccgacgcggccggcggcgagccgcggatctccacctaccacgccttcgccggacagctc
ctgaaggaccacggcctgcgcatcggactggagcccagcgcccgcctcctcgccgacgcc
acccgcttccagctcgccgcgaaggtgctccgcgaggcccccggcccctacccgtcgctc
accaagtccgtccccgacctggtcagcgacctgctcgcgctcgatgcggagctctccgag
cacctcgtcgagccggccggcctgcgcgcgtacgacaccgagctgctgcacaccctctcc
gggaccaagctgaccaacgaggacctgcgcaaggtccccgaggccgtgcgcggccggctc
gaactgctggagctcgtcggccgctaccgcgccgccaaacgctcccgcgacctcctcgac
ttcagcgaccagatagccctctccgcgcagctcgccaccacccggcccgaggtgggggcg
ctgctgcgcgaggagttcaaggtggtcctgctcgacgagtaccaggacacctccgtcgcg
cagcggctgctgctgtccggcctcttcggcgcgggcagcgggcacgccgtgaccgccgtc
ggcgacccctgccaggccatctacggctggcgcggggcctccgtggccaacctcgacgac
ttccccgagcacttcccgcacgccgacggcaccccggccacgcgccagtccctcagcgag
aaccggcgcagcggcggccgcctcctggacctggccaacggcctcgccgccccgctgcgg
tccctgcacgaaggggtcgaggcgctccgccccgcccccggggcggagggggccggttcc
gtccggtgcgccctgctggagacgcacgccgaggagctggagtggctcgccgactccgtc
gcccacctggtccgcaccgggacggagccgcgcgagatcgccgtcctgtgccggtccgcc
ggggacttcgcgcggatccaggccgtgctggtggcccgggacgttccggtggaggtcgtc
ggcctgtccgggctgctccacctgcccgaggtcgcggacctcgtcgccgtctgcgaggtc
ctccaggaccccggggccaacgcctccctggtccggctgctcatcggcccgcgctggcgg
atcggcgcgcgcgacctggcgctcctggggcgccgggcccggctgctgatcggccgttcc
gcgggcgacgcggcggacgccgacgaacggctcgccgcagccgtcgaaggcgtggacccg
gccgagatcgtgtccctggccgacgccctggagaccttcctcgacggcggcgggcaggcc
ccggacgacctgcccttctccgcggaggcgcgggtccgcttcgcccacctcgcccaggag
ctacgcgacctgcgccgttcgctggccgatccgctgatggacgtcctgcaccgggtgctg
tccgccaccggcctggaagtggaactgtccgcctccccgcacgcgctggccgcccgccgc
cgggagaccctgtcgaacttcatggacgtggccgccggtttcgccgcgctggacggcgag
gcctcgctgctggcgttcctggccttcctgcgcacggccgcccagtacgagaaggggctg
gaccacgccctgcccggcggggagaacacggtcaaggtcctgacggcccacaagtccaag
ggcctggagtgggacgtggtcgtcgtccccgacctgtgcgcgggcgccttccccaaggag
aaggcgcccgaggcctggacctcgtacgcgaaggtgctcccgtacgccctgcgcggcgac
gcggccaccctgcccggggatccggcctggacctcggccggcctgaagtccttcaaggca
tccctgaaggagcacaaggcgacggaggagctccgcctcgggtacgtgacgttcacccgg
ccgcggtccctgctgctggcctccgggcactggtggggcccgacccagaagaagcgccgc
ggtccgtccgccttcctgaccgcgctgtacgagcactgcgcggccggggcgggcgagatc
gaggtctgggccgaggaacccgcaccggacgcggagaacccggccctgtccgaggacgcc
gccgccgaccactcctggccgctgcccctggacccggactcgctcgccctgcgccgcacc
gccgcggccctggtggagtcctacctggcggccccgccgcccccggaggagtccgctgcc
ggggactacctgtggcccccggactgcgaggacccgtcctacgaggacgaaccctggccg
gacgaggaagccgacccggacgcgcacgccggccccgacgcgcacgccggccccgacgcg
tacgccgggccggacgaagaccccgcccccgcgcccgcccccgtccccgctccccgcccc
gaggccgcaaccccgccccggagcaccgccgtgcccgcgtccgacgccggcgccgacccc
gacgccgacccgtgggcggccgagccctgggcgcagccggcccggcggtccgggctcccg
caccagggccggggcaccgccgtgcccgcgtccgacgccggcgccgaccccgacgccgac
ccgtgggcggccgagccctgggcgcagccggctccgccgcgtgcccgtgccgccgccggg
ccggacccgctcacccccgaggaggcgcgggcgatcgcctcctgggaccgggacctcgaa
gccctggagggcgagctgcgccgggcccgtgcggccgtgcgcgacgtggagctgcccgcc
gcgctctccgccagccagctgctccggctcgccgccgacgagcagggcttcgcccgcgac
ctcgcccgccccatgccccggcccccgcagcccgcggcccgccagggcacgcgcttccac
gcctgggtcgagtcccgcttcgacgagctgcccctgccgctcctcgacgtcctggacccc
gccaccgagctgcccggctccgaccaggagatcgtcgacgaggccgacctggagtccctc
aaggccgccttcgagcgcagcccgtacgccgagcggaccccgtaccggatggaggccccc
gtccagctgaccctcgccggacgcgtcgtccgcggccggatcgacgcggtgtacaagaac
ccggacggctcgtacgagatcgtcgactggaagaccggccgcaccaccgaggccgacccc
ctccagctcgccgtgtaccggctggcctggtcggaggccaccggcacccccctggagcag
gtcggggccgtcttcctgcacgtgcgcagcggccgcgtcatccgcccccgcgacctgccc
gaccgggcccgccttgagcggatcctccaaggcaaatcgggcaccggccgggccccccgg
acggaaggctag
DBGET
integrated database retrieval system
