Streptomyces xanthophaeus: KPP03845_106308
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Entry
KPP03845_106308 CDS
T08962
Symbol
fpg2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sxt
Streptomyces xanthophaeus
Pathway
sxt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sxt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KPP03845_106308 (fpg2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxt03400
]
KPP03845_106308 (fpg2)
Enzymes [BR:
sxt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KPP03845_106308 (fpg2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KPP03845_106308 (fpg2)
DNA repair and recombination proteins [BR:
sxt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KPP03845_106308 (fpg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WCD89884
LinkDB
All DBs
Position
6945599..6946459
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AA seq
286 aa
AA seq
DB search
MPELPEVEALREYLDEHLTGRVVERVHPLAVSVLKTYDPPVTALEGRTAGATARHGKFLA
LAVGDLHLVTHLARAGWLRWQETLPAQPPRPGKGPLALRVALQGGGGFDLTEAGTQKRLA
VYVVRDPLQVPGIARLGPDPLAPGFDREALAALLAGERRQIKGVLRDQSVVAGIGNAYSD
EILHRARVSPFKLAASFDEEQTALLYAAVQDTLREAVARAHGLAAGELKAEKKSGLRVHG
RAGEPCPVCGDTVRSVSFADSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccagaggtcgaggccctgcgcgagtacctcgacgagcacctgaccggg
cgggtggtggagcgcgtccacccgctcgccgtgagcgtgctcaagacgtacgacccgccg
gtcaccgccctcgaaggccgcacggccggtgccacggcccgccacggcaagttcctggcg
ctggccgtcggcgacctccacctcgtcacccatctggcccgggccggctggctgcgctgg
caggagaccctgcccgcccagcccccgcgccccggcaaggggcccctcgcactgcgcgtg
gcccttcagggcggcggcggcttcgacctcaccgaggccgggacgcaaaagcgcctcgcc
gtgtacgtcgtgcgcgatccgctccaggtgccgggcatcgcacggctcggtccggacccg
ctggcaccggggttcgaccgggaggccttggccgcgctgctggcgggggagcggcgccag
atcaagggcgtcctgcgcgaccagagcgtcgtcgcgggcatcgggaacgcgtacagcgac
gagatcctgcaccgggccagggtctcgcccttcaaactggccgcctccttcgacgaggag
cagaccgccctgctgtacgcagccgtccaggacaccctgcgcgaggccgtcgcccgggcc
cacgggctggccgccggagagctgaaggcggagaagaagagcggcctgcgggtgcacggc
cgggccggggagccctgcccggtgtgcggggacacggtccgctcggtgtccttcgccgac
tcctcgctccagtactgccccacctgccagaccggcgggaagccgctcgccgaccggcgg
ctctcgcgcctcctcaaatag
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