Staphylococcus xylosus HKUOPL8: BE24_01360
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Entry
BE24_01360 CDS
T03248
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sxy
Staphylococcus xylosus HKUOPL8
Pathway
sxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BE24_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxy03019
]
BE24_01360
03400 DNA repair and recombination proteins [BR:
sxy03400
]
BE24_01360
Enzymes [BR:
sxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BE24_01360
Messenger RNA biogenesis [BR:
sxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BE24_01360
DNA repair and recombination proteins [BR:
sxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BE24_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AID00789
LinkDB
All DBs
Position
272058..273836
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AA seq
592 aa
AA seq
DB search
MESTLSHYFGYDTYRPGQKEIISKVLDHQNVLGVLPTGGGKSICYQVPGLMLGGTTIVIS
PLISLMKDQVDQLKAMGIRAAYLNSSLTQKQQKEIETQLRKGEIQFLYVAPERFDNAYFI
SLLQQLSIHLVAFDEAHCISKWGHDFRPSYQDVIHKVFALPQDFTIVALTATATIEVQKD
IMERLNIGKNDEIKTSTKRRNLVFQVNPTYQRQKFVMEYVKQHKKAAGIIYCSTRKQVEE
LHEALQNNDINSTIYHAGLTNKEREAAQNDFVYDRVRIVVATNAFGMGIDKSNVRFVIHY
NMPGDLESYYQEAGRAGRDGLNSDCILLFSERDIGLHQYFISSSKADDDYKDKMGEKLTK
MILYTKTKKCLEATLVHYFEPNEKLEECEQCSNCVIENKTYNMTNEAKMIVSCIARMKQK
ESYSVIIQVLRGEDSDYIRYCDYNELSTHGIMKNYTTSELSHLIDELRFKGFLNEHDEIL
TCDQSVKNLLGEQVEIFTTPFKRKTREKVNINTVEGVDRALFDELISVRKELSESLSIPP
VSIFSDFTLEEFAKRKPETKQEMILIEGVGSYKLKHYCPMFLEKIQSYKSKI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaactttatcgcattattttggctatgacacataccgtcctggtcaaaaagaa
atcatatcaaaagtattagatcatcaaaatgtgctcggcgttttacctaccggcggggga
aaatcaatttgttatcaagtaccaggattaatgttgggtggcacaacaattgtaatcagc
ccattaatctcattgatgaaagaccaagttgatcaattaaaggcaatgggtattcgtgca
gcatatttaaatagtagtttaactcaaaaacaacaaaaagaaattgaaacacaattaaga
aaaggtgaaattcaattcttatatgttgcaccagaacgttttgataacgcttattttatt
agcttattacaacaattatcaattcatttagttgcttttgatgaagcgcactgtatttct
aaatggggacatgattttagaccaagttatcaagatgtaatccataaggtatttgcattg
ccacaagactttacgatcgttgcactaactgcaacagcaactattgaagttcaaaaagac
ataatggaacgtttgaatataggaaaaaatgatgagataaaaacgagtacaaaaagacga
aatctcgtgtttcaagtcaatcctacatatcaacgacaaaaatttgttatggaatatgtg
aagcaacataaaaaggcagcgggcattatctactgctctacacgtaaacaagttgaagaa
ttacatgaagctttacagaataatgatatcaacagcacgatttatcacgctggactaaca
aacaaagaacgtgaagcagcgcaaaatgattttgtgtatgatcgagtacgtattgttgtt
gcgactaatgcttttggtatgggtatagataaatccaatgtgagatttgttatacattat
aatatgcctggcgatttagaatcgtattatcaagaagcagggcgtgccggtcgtgatggc
ttgaacagtgattgtatcttattatttagtgaacgagatattggattacatcaatatttt
atttcatcttcaaaagctgatgatgactataaagataaaatgggtgaaaaattaacaaaa
atgattctctacactaaaacgaaaaaatgtttagaggccactttagttcattattttgaa
ccaaacgaaaaacttgaagaatgtgaacaatgtagtaattgtgtcattgaaaataagact
tataatatgacgaacgaagcgaaaatgattgtaagttgtatagctcgtatgaagcaaaaa
gagagttatagtgtcattatacaggtgttaagaggcgaagattctgattatattcgttat
tgtgattataacgaactctcaacacatggaattatgaaaaattatacaacttcagaactt
agccatttgatagatgaattgagatttaaagggtttttaaatgaacacgatgagatttta
acgtgtgatcaatctgttaagaatttgctcggcgagcaagttgaaatatttacaactcca
ttcaaacgaaaaactagagaaaaagtaaatataaatacagtagaaggtgtggaccgtgca
ctatttgatgaattgattagcgtccgcaaagaattaagtgagagcttgagtattccacca
gttagtattttttcagattttacattagaagaatttgctaaaagaaaaccagaaacaaaa
caagaaatgattttaattgaaggtgtaggtagttataaattaaaacattattgcccgatg
tttttagaaaaaattcaatcatataaatctaaaatctag
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