Staphylococcus xylosus HKUOPL8: BE24_04775
Help
Entry
BE24_04775 CDS
T03248
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sxy
Staphylococcus xylosus HKUOPL8
Pathway
sxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BE24_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxy03019
]
BE24_04775
03400 DNA repair and recombination proteins [BR:
sxy03400
]
BE24_04775
Enzymes [BR:
sxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BE24_04775
Messenger RNA biogenesis [BR:
sxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BE24_04775
DNA repair and recombination proteins [BR:
sxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BE24_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AID01422
LinkDB
All DBs
Position
complement(986024..987406)
Genome browser
AA seq
460 aa
AA seq
DB search
MLHDDLKRWFGFESFKPGQEEIINNVLNNIDTLGILPTGSGKSLCYQLPTYIKQKPTLVI
SPLISLMDDQVMQLKVQGEKDVCCIHSGMDENEKQQNINHLKMSKFIFLSPEFILQKHNF
KLIKNLNIGMIVLDEAHCLSEWGYDFRPHYALVGEITNHFNEATVLALTATAPSYLTFDL
EQILGKSFSVIKNSMNRDNISLTHKNFADDDEKLNWLLPTLEQSGPTIIYVSSKKMCLSL
AQSIYNYGFLTGIYHGDLSYQERHTVQHQFINNEIPIIVATSAFGMGINKKDIRTIIHFH
LSTSPSSYMQEIGRAGRDGNQSQAISLYQPDDSFLLETLLFTDIINIEDINAYELSQFLP
PEKTDILDVLSTQYTFGQLRNIFDLAYKRKKLGYIRMLGYKNLDQCRRSYLVEFFDEILV
EKPKQCCDNDCELNLLNIINRKKVKRKMDFNEKLQNMFKT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttacacgatgatttaaaaagatggtttggatttgaatcatttaagccggggcaagaa
gaaattattaataatgtccttaataatattgacactttaggtattttacctactggtagt
ggcaaaagcttatgttaccaattgccaacctacataaaacaaaagccaacattagttatt
tcaccgttaatttcactgatggatgaccaagttatgcaactcaaggtacaaggagaaaaa
gatgtatgttgcatacattcaggcatggatgaaaatgaaaaacaacaaaatataaatcac
ttaaagatgagtaaatttatatttttaagtccagagtttatattacaaaaacacaatttc
aaattaattaaaaatttaaatatcggtatgatcgtattagatgaagcacactgtttatca
gaatggggatatgattttagaccacactatgcgcttgtaggagaaattacaaaccatttc
aatgaagctaccgtattagcattaactgcaacggcaccttcttatttaacttttgattta
gagcaaatattaggtaagtcattttcagttataaaaaatagtatgaacagagataacatt
tctctaacacataaaaattttgctgatgatgatgaaaaattaaactggcttttacctaca
ttagagcaatcaggaccgactattatttacgtatcatctaaaaaaatgtgtctatcatta
gctcaaagtatttataattatggttttttaactggtatttaccacggtgatttatcatac
caagaaaggcatacagtacaacatcagtttattaataacgaaatccccattatcgttgct
acaagtgcctttggcatgggaattaataaaaaagatattagaacaattattcatttccat
ttatctacaagtccatctagttatatgcaagaaataggtagagcagggcgtgatggtaat
caaagccaagcaataagcctttatcaacctgatgacagctttctgttagaaactttatta
tttacagacataattaatatagaagatataaatgcgtatgaattatctcagtttctacca
cccgaaaagacagacatactcgatgtactcagtacacagtatacttttggacaattacgt
aatatctttgatttggcttataaacgtaaaaaattaggttatatacgtatgctaggttat
aaaaaccttgatcagtgcagaagatcttatttagttgaattttttgatgaaattttggta
gaaaagcctaaacaatgttgcgataatgattgtgaattaaatttattaaatataataaat
agaaaaaaagtaaaaagaaaaatggattttaatgaaaaattacaaaatatgtttaaaaca
tag
DBGET
integrated database retrieval system
