Staphylococcus xylosus HKUOPL8: BE24_05540
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Entry
BE24_05540 CDS
T03248
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sxy
Staphylococcus xylosus HKUOPL8
Pathway
sxy03030
DNA replication
sxy03430
Mismatch repair
sxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BE24_05540
03430 Mismatch repair
BE24_05540
03440 Homologous recombination
BE24_05540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxy03032
]
BE24_05540
03400 DNA repair and recombination proteins [BR:
sxy03400
]
BE24_05540
Enzymes [BR:
sxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BE24_05540
DNA replication proteins [BR:
sxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BE24_05540
DNA repair and recombination proteins [BR:
sxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BE24_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
PFF1_TM
SID-1_RNA_chan
DUF6688
DUF6056
8xMP
Motif
Other DBs
NCBI-ProteinID:
AID01547
LinkDB
All DBs
Position
1107852..1108907
Genome browser
AA seq
351 aa
AA seq
DB search
MKMVLYYSLLIFSILMVIGGIGVMSETGVDLVSIIMLFAFVCLTILSITKISKINRHRQS
NKENKIANKQKDISDYRKNKEDTLTQTESISVENESKNSEDSDIKNDGNNEDKDLKRQNE
LLKMKLDLKEKYIKEIETEKTNINHSNNESYDVKHIENSEQISEEKYAEPLDLTYTKAKK
LAPNFVVLDFETTGLKYQENEIIQYGVVEYQEGRVIDEHTKYFKPNKPVGKTVMRKTGIT
NEFLEDNPKLSEVYMEELKNLLEGKTIVAHNAPFDLKFLLKNLYDFNIEHKKFRVFDTLT
YARRLIDETPNHKLETLKNHFNLDDGLSHNALNDCRATGKLALMLINRMDK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggtgttatattattcgcttttaatattttcaatcttaatggtgattggaggt
atcggcgttatgtcagaaaccggagtagacctcgttagcatcataatgttgtttgctttt
gtgtgccttactattttaagtataacaaaaatatcgaaaatcaatcgacatagacaaagt
aacaaggaaaacaaaattgcaaataagcaaaaagatataagtgattatagaaaaaataaa
gaagatacactaacgcagacagaaagcatttccgtcgaaaatgaaagcaagaacagtgaa
gacagtgacattaagaatgatggcaacaatgaagataaagatttaaaaagacaaaacgaa
ttgttgaaaatgaaacttgacttaaaagaaaagtatataaaggaaatagaaactgaaaaa
acaaatataaatcattcaaacaatgagtcctatgatgttaaacatattgaaaacagtgaa
caaataagtgaggaaaaatatgcggagcctttagatttaacctatacaaaagctaagaaa
ttagcaccaaactttgtagttttggattttgaaactacaggtttgaaataccaagaaaat
gaaattatccaatatggtgtcgttgaataccaagaaggaagagtaattgatgaacataca
aaatacttcaaaccaaataaaccagttggcaaaactgttatgcggaaaacaggcataact
aatgaatttttagaagataatcccaaattatctgaagtatatatggaagaactgaaaaat
ttacttgaaggaaaaactattgtagctcataacgctccttttgatttaaaattccttttg
aaaaacctttatgattttaatatagaacataaaaaatttagagtattcgatactttaact
tatgcaagaagattgatagatgagactccaaatcataaattagaaacactaaaaaatcat
tttaatttagatgatggattgtctcataatgcactaaatgattgtagggctactggtaaa
ttagcactaatgttaattaatagaatggataaataa
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