Staphylococcus xylosus HKUOPL8: BE24_05765
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Entry
BE24_05765 CDS
T03248
Name
(GenBank) RecD/TraA family helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sxy
Staphylococcus xylosus HKUOPL8
Pathway
sxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BE24_05765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxy03400
]
BE24_05765
Enzymes [BR:
sxy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BE24_05765
DNA repair and recombination proteins [BR:
sxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BE24_05765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
AAA_12
nSTAND3
AAA
Zeta_toxin
NPHP3_N
TsaE
AAA_14
Rad17
AAA_16
T2SSE
AAA_28
Mg_chelatase
UvrD-helicase
DUF815
ABC_tran
AAA_18
AAA_29
SLFN-g3_helicase
AAA_17
NB-ARC
DUF3297
UvrD_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AID01586
LinkDB
All DBs
Position
complement(1148699..1151086)
Genome browser
AA seq
795 aa
AA seq
DB search
MENPTLFNNSMIKGTVDAILFQNKENFYTVLKVDTIESNETFDSMPTIVGFFPDIAEGDV
YTFKGQVVTHAKYGKQLKAETFEKELPQTKEAIISYLSSDLFKGIGKKTAQSIVNKLGEN
AISDILNDPTILEKVPSLPKKKQKQIAEQIASNQETEQIIIRLHDLGFGPKLAMAIYQAY
LGETLNVVEKKPYQLVYDVKGIGFNKADTLARNVGIQFNDAERLKAGLLYVLEEECIKQG
HTYLPTNNVLEMTQDMLSQPPGELIETQQLEQVLQDLVNDTKLIQQENEVAIPSLYYSEL
KSVQNLYRNFSYTNKLKEIEQSDLLLEIGEIEERNKVTYADSQREALQTAINSKIMLLTG
GPGTGKTTVIKGIVELYAELHGLSLDYDDYQNDDYPVVLGAPTGRASKRLSESTGLEAMT
IHRLIGWNQDTQPEDILDNEISAKLIIIDEMSMVDTWLFHQFLSAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVIPRVNLTEVYRQQDGSSIIELAHRMKLGETIDITQRFHDRNF
INCTTEQIPSVVEKVVSSAVNKGYDMSDIQVLAPMYKGSAGIKKLNTVLQDILNPKEQDT
REIEFGDIVFRKGDKVLQLVNRPSDNIFNGDIGVIVGIFWAKENALNKDVLVVDFEGNEI
TFVRQDLMELTHAYCTSIHKSQGSEFPIVIMPMVKQYFRMLQKPILYTGLTRAKQSLVFL
GDPQAFDIGLKTHGQVRMTQLCAFLKAYFNNEEETETADVSKSFDSDIILSEENIFKINP
MINMGEFSPYDFVED
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccctacactatttaacaattcaatgattaaagggaccgttgatgcgattttg
tttcaaaacaaagagaatttttatacggttttaaaagttgatacgattgaatccaatgag
acatttgattcaatgcctacaattgtagggttttttccagatattgcagaaggtgacgtc
tatacatttaaaggccaagtagttacgcatgcaaaatatggcaaacaattaaaggctgaa
acatttgaaaaagagttaccacaaacgaaagaagcaattataagttatttatctagtgat
ctttttaaaggaataggaaaaaaaacagctcaaagtattgtaaataaattaggtgaaaat
gcaattagcgacatattaaatgatccaactatattagaaaaagtgcctagtttacctaaa
aagaaacaaaaacaaattgctgaacaaatcgcaagtaatcaagaaacggaacaaattatc
attcgcctccatgatctaggttttgggccaaagttagcaatggctatataccaagcatat
ttaggcgaaacacttaacgtagttgaaaaaaaaccttatcaacttgtatatgatgtcaaa
ggcatcggttttaataaggcagacacattagcgcgtaatgtcggcattcaatttaacgat
gcagaacgtcttaaagcagggttactttatgtgttagaagaagagtgtataaaacaaggt
catacgtatttacctactaataatgtactagagatgacccaagatatgctatcacaacca
ccaggtgaattaatagaaactcagcagcttgagcaagttttacaagatttagtcaatgac
actaaattaattcaacaagaaaatgaagttgcgatcccaagtttatactattcagaattg
aaaagcgttcaaaatttataccgtaatttttcttatacaaataaactaaaagaaattgag
caatctgatttgctgcttgaaataggagaaattgaggaacgcaataaagtgacatatgca
gattctcaaagagaagccttgcaaacagcgattaactctaaaataatgttactgacaggt
ggcccaggtacaggaaaaacaactgtcattaaaggaattgttgaactttatgcagagttg
catggtctatcattagattatgacgattatcaaaatgatgattatccggtagttctaggt
gcgccgactggacgtgcatcgaagcgtttgtcagagtcaacaggtttagaggctatgacg
atacatcgcttaataggttggaatcaagatacgcaaccagaagatatcttagataatgaa
atttctgcaaaacttattattattgatgaaatgtcaatggttgatacatggttattccat
caatttttgagtgctgtacctattgatgcgcaagttatactagtcggtgatgaagatcag
ttgccatctgttggaccaggccaagtatttaaagatctaattgactcgaaagtaattcct
cgtgtaaatttaactgaagtttaccgacaacaagatggctcaagtattatagaattagca
cataggatgaaactaggagaaactattgatattacacagaggtttcatgaccgtaatttt
ataaactgtacaacagaacagataccctcagttgttgaaaaagtggtatcaagtgcagtg
aataaaggttatgatatgagtgatattcaagtattagctccgatgtataaagggtctgca
ggtattaagaagctaaatacagtattgcaagatatcttgaatcccaaagaacaagatact
agagaaattgagtttggtgatattgtctttagaaaaggtgataaggtattacaactagtt
aaccgaccaagtgataatatatttaatggtgatatcggggtcattgtaggcatcttctgg
gctaaagaaaatgcattaaacaaagatgttttggtagttgattttgaaggtaatgagatt
acatttgttcgtcaagacttaatggagttgacgcatgcctattgtacttcaattcataag
tcacaaggatcagaatttccaattgtgattatgccaatggttaaacagtactttagaatg
cttcaaaaacctatattatatacaggtttaacacgtgccaaacagtcacttgtgttctta
ggagatccgcaagcatttgatattggtctaaagactcacggccaagtgagaatgacgcaa
ttgtgtgcttttcttaaagcgtattttaataatgaggaagaaactgaaactgctgatgtc
agtaaatcctttgattcagatattatattgtctgaagaaaatatatttaaaataaatcca
atgattaatatgggtgaattttccccgtatgacttcgttgaagattga
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