Sphingobium yanoikuyae: A6768_00055
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Entry
A6768_00055 CDS
T05170
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00300
Lysine biosynthesis
sya01100
Metabolic pathways
sya01120
Microbial metabolism in diverse environments
sya01230
Biosynthesis of amino acids
Module
sya_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A6768_00055
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sya01002
]
A6768_00055
Enzymes [BR:
sya01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
A6768_00055
Peptidases and inhibitors [BR:
sya01002
]
Metallo peptidases
Family M20
A6768_00055
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ATI78542
UniProt:
A0A291MTY5
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All DBs
Position
complement(11117..12259)
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AA seq
380 aa
AA seq
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MTKTSTNHDALALAERLLACPSVTPAVGDVFAELEAMLVPLGFTVDRFVSGVAPDGPVEN
LLAWRTTGAGPHFAFAGHLDVVPPGHGWASDPFTPVVRGDLLYGRGAVDMKGAIAAFVAA
LHELPDSLPGTISLIITGDEEGPATYGTLALMDRMVAHGLHPDMCLVGEPTSSARLGDVV
KIGRRGSVNMWIKVAGTQGHVAYPHLADNPIPALVRILAKVDAEVLDEGTDWFQPSNIEI
TDLEVGNPAHNVIPAAATARISIRFNDQHSGASLIDRISAIAASEGGSVEAKISGEPFLT
QPGTLSNLISDAIRDVTGLDTELSTTGGTSDARFLSRLCPVAEFGLNNATMHKLDEAVAI
ADLHDLTRIYTLITERALRG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaccagcaccaatcacgacgccctggccctggccgagcgcctgctcgcctgc
ccctccgtcaccccggccgtcggcgatgtgttcgccgaactggaagcgatgctggttccg
ctgggcttcaccgtagaccgtttcgtcagcggcgtcgcgcccgacggcccggtcgaaaat
ctgctcgcctggcgcaccaccggcgccggcccgcatttcgcctttgccggccatctcgac
gtcgtcccgcccggccatggctgggccagcgatcctttcaccccggtggtgcgcggcgac
ctgctctacggccgcggcgcggtcgacatgaagggcgcgatcgccgccttcgtcgcggcg
ctgcacgaattgcccgacagcctgcccggcacgatcagcctgatcatcaccggcgacgag
gaagggccggccacctatggcacgctggcgctgatggaccggatggtcgcccatggcctg
caccctgacatgtgcctggtcggcgagccaacctcctcggcccggctgggcgacgtggtg
aagatcggccggcgcggctcggtcaacatgtggatcaaggtggcgggcacgcagggccat
gtcgcctatccgcacctggccgacaatccgatcccggcgctggtccgcatcctggccaaa
gtggatgccgaagtgctggacgagggcaccgactggttccagcccagcaatatcgagatc
accgacctggaagtcggcaacccggcccataatgtcatcccggcggcagcaaccgcgcgc
atctcgatccgcttcaacgaccagcatagcggcgcgtcgctgatcgatcggatcagcgcg
atcgcggcgagcgagggcggcagcgtggaggccaagatcagcggcgagccgttcctgacc
cagccgggcacgctgtccaacctgatcagcgatgcgatccgcgacgtgacgggcctcgac
accgaattgtcgaccaccggcggcacgtcggacgcgcgcttcctctcgcgcctctgcccg
gtcgccgaattcggcctcaacaatgctacgatgcacaagctggacgaggccgtcgcgatc
gccgacctgcacgacctgacccgcatttacacgctgatcacggaacgggcgctgcggggc
tag
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