Sphingobium yanoikuyae: A6768_01000
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Entry
A6768_01000 CDS
T05170
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sya03032
]
A6768_01000
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_01000
Enzymes [BR:
sya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A6768_01000
DNA replication proteins [BR:
sya03032
]
Prokaryotic type
DNA Topoisomerases
A6768_01000
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A6768_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2748
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
ATI78706
UniProt:
A0A291MUE5
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All DBs
Position
209512..210621
Genome browser
AA seq
369 aa
AA seq
DB search
MASQPIIADSESGSVVHPQEAAESAGLTYVNDNEPGIKRLRHGKSFRYVDQGGKPLRDRN
TLDRIRKLAIPPAYTDVWICAGEDGHIQATGRDAKGRKQYRYHARFREVRDGTKYEHMLE
FAKALPAIRAKIDEHLGLRGLPREKVLATIVRLLETTMIRVGNADYAKQNKSYGLTTLKD
RHVAVEGAELRFNFKGKSGKRWRLSIRDRRIARIVKASQDLPGQHLFQYLDEDGAQREVS
SGDINAYLKEISGTAITAKDFRTWSGTVLAAIALSEYEKVDSAAAAKRNVREAIEAVSAR
LGNTPTVCRKCYIHPEVFESYLSDALVLEARDEASKELRGDLAHLRPEEAVVLAFLHERL
SAKAKDVAA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaaccgatcatagccgacagcgaaagcggctccgttgtccacccgcaagag
gccgccgagagcgccgggctgacctatgtcaacgacaacgaaccgggcatcaaaaggctt
agacacggtaagagcttccgctacgtcgaccagggcggaaagccgttgcgcgatcgcaac
acgctcgatcgcatccgcaagcttgccatcccgcccgcttatactgatgtgtggatctgc
gctggcgaggacgggcatattcaggcgaccggccgggatgccaaggggcggaagcagtat
cgctatcatgcgcgattccgcgaagtgcgcgacggtacgaagtacgagcatatgctcgaa
ttcgcaaaggcgctgccggcgattcgcgccaaaatcgacgagcatctgggcctgcgcggt
ctgccgcgcgagaaagtgctcgcgacgatcgttcgcctgctggaaacaaccatgatccgc
gtcggcaatgccgattatgcgaagcagaacaagagttacggcctgacgacgctcaaggac
cggcacgtcgcggtcgaaggtgctgaactgcgcttcaacttcaagggcaagagcggcaag
cggtggcggctcagcatccgcgatcgccgtatcgcccggatcgtcaaggcgagccaggac
ctgccaggccagcatctgttccaatatctcgatgaagatggcgctcagcgcgaggtcagt
tcgggcgacatcaacgcctatctcaaggaaatctcgggcacggccatcaccgccaaggat
ttccggacgtggagcggaaccgtcctcgccgccatcgcgctttccgaatatgagaaggtc
gatagcgccgcagcagccaagcgcaacgtccgcgaggctatcgaagcggtctcggcacga
ctcggcaacaccccaacagtctgccgtaaatgctatatccatcccgaagtgttcgaaagt
tacctcagcgacgcgttggtgctggaggcacgcgacgaggcgtccaaggaactgcgcggg
gatcttgcgcacctgcgcccggaagaggctgtcgtactcgccttcctgcacgagcggcta
agcgccaaggcgaaggacgtggccgcatag
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