Sphingobium yanoikuyae: A6768_02470
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Entry
A6768_02470 CDS
T05170
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00010
Glycolysis / Gluconeogenesis
sya00020
Citrate cycle (TCA cycle)
sya00260
Glycine, serine and threonine metabolism
sya00280
Valine, leucine and isoleucine degradation
sya00310
Lysine degradation
sya00380
Tryptophan metabolism
sya00620
Pyruvate metabolism
sya00630
Glyoxylate and dicarboxylate metabolism
sya00640
Propanoate metabolism
sya00670
One carbon pool by folate
sya00785
Lipoic acid metabolism
sya01100
Metabolic pathways
sya01110
Biosynthesis of secondary metabolites
sya01120
Microbial metabolism in diverse environments
sya01200
Carbon metabolism
sya01210
2-Oxocarboxylic acid metabolism
sya01240
Biosynthesis of cofactors
Module
sya_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sya_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sya_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sya_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
A6768_02470 (lpdA)
00020 Citrate cycle (TCA cycle)
A6768_02470 (lpdA)
00620 Pyruvate metabolism
A6768_02470 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
A6768_02470 (lpdA)
00640 Propanoate metabolism
A6768_02470 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A6768_02470 (lpdA)
00280 Valine, leucine and isoleucine degradation
A6768_02470 (lpdA)
00310 Lysine degradation
A6768_02470 (lpdA)
00380 Tryptophan metabolism
A6768_02470 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A6768_02470 (lpdA)
00670 One carbon pool by folate
A6768_02470 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sya04147
]
A6768_02470 (lpdA)
Enzymes [BR:
sya01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
A6768_02470 (lpdA)
Exosome [BR:
sya04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
A6768_02470 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
FAD_binding_2
GIDA
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
HI0933_like
Thi4
FAD_binding_3
Lys_Orn_oxgnase
3HCDH_N
DAO
Motif
Other DBs
NCBI-ProteinID:
ATI78979
UniProt:
A0A084EQA5
LinkDB
All DBs
Position
529633..531033
Genome browser
AA seq
466 aa
AA seq
DB search
MSDFDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASE
LYDEAANGALAKLGVKIDKMSLDLPTMQGQRVDAIKGLTGGIEYLFKKNKVTWLKGLASF
TGANTVEVNGEKVTAKNIVIATGSSVAPLPGVAVDNAGGKIVDSTGALELDKVPGHLVVV
GGGVIGLELGSVWKRLGAKVTVVEYLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTG
AEVGKSGVTLTVEPAAGGEAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDH
EFGTKVPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAG
VGLTEEAAKERGAVKVGKFPMMANSRAKTNHEPDGFVKIIADAETDKVLGVWIIATVAGT
MIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHM
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttcgattatgacgtcctggttatcggtgctggcccgggtggctatgtcgcc
gcgatccgcgctgcgcagctgggcctgaagaccgcctgcgctgaaagccgcgagacgctt
ggcggcacctgcctcaatgtcggctgcatcccgtcgaaggcgctgctgcacgcctcggaa
ctttatgacgaggccgccaatggcgcgctcgccaagctgggcgtcaagatcgacaagatg
agcctggacctgcccaccatgcagggccagcgcgtcgatgccatcaagggcctgaccggc
ggcatcgaatatctgttcaagaagaacaaggtgacctggctcaagggcctggccagcttc
accggcgccaacaccgtcgaagtgaatggcgagaaggtgacggcgaagaacatcgtcatc
gccaccggttcgtcggtcgccccgctgcccggcgtggccgtggacaatgcaggcggcaag
atcgtcgattcgaccggcgcgctggaactggacaaggttccgggccatctggtcgtcgtc
ggtggcggcgtcatcggcctggaactgggttcggtgtggaagcgcctgggcgccaaggtg
accgtggtcgaatatctcgaccagatcctgcccggcatggacggcgaagtccgcaaggaa
gccaacaagatcttcaagaagcagggcttcgaatataagctcggcaccaaggtgaccggc
gccgaagtcggcaagtcgggcgtgaccctgaccgtcgaacccgccgccggtggcgaagcc
gaaaagatcgaggctgacgttgtcctggtgtcgatcggtcgtcgtcccaacaccgagggc
ctgggcctcgacaagattggcctggagctgaacgcgcgcggtcagatcgagaccgatcat
gagttcggcaccaaggttccgggcgtctgggcgatcggcgacgtcatccccggcccgatg
ctggcgcacaaggccgaggacgaaggcattgccgtcgccgagaatattgccggcctgacc
ggcatcgtgaaccatgacgtgatcccctcggtggtctacaccaagccggaaatcgcgggc
gtgggcctgaccgaggaagccgccaaggaacgtggcgccgtcaaggtcggcaagttcccg
atgatggcgaacagccgtgcgaagaccaatcacgagcccgacggcttcgtgaagatcatc
gccgacgccgaaaccgacaaggtgctgggcgtgtggatcatcgccaccgtcgccggcacg
atgatcgcacaggccgcgcaggccatggaattcggcgcgtcgagcgaagacatcgcctat
acctgccatgcgcatccgacgcacagcgaagcgatcaaggaagcggcgatggccgtgacc
ggcaagccgatccacatgtga
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