Sphingobium yanoikuyae: A6768_03235
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Entry
A6768_03235 CDS
T05170
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00061
Fatty acid biosynthesis
sya00071
Fatty acid degradation
sya01100
Metabolic pathways
sya01212
Fatty acid metabolism
sya02024
Quorum sensing
sya04146
Peroxisome
Module
sya_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A6768_03235
00071 Fatty acid degradation
A6768_03235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A6768_03235
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6768_03235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sya01004
]
A6768_03235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sya04147
]
A6768_03235
Enzymes [BR:
sya01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A6768_03235
Lipid biosynthesis proteins [BR:
sya01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A6768_03235
Exosome [BR:
sya04147
]
Exosomal proteins
Exosomal proteins of breast milk
A6768_03235
Exosomal proteins of breast cancer cells
A6768_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ATI79121
UniProt:
A0A291MVT9
LinkDB
All DBs
Position
686468..688189
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AA seq
573 aa
AA seq
DB search
MESREKIWREHYQHPTPWEQTFPPMSMGDMVTQSATAHPQAHMIDFMGRKFSYGAMMDDI
RRIACGLQAMGVKKGDRVGLYLPNTPHYVAAYYGALLAGAIVVNFSPLYTAAELEHQVED
SGTKILFTLSAKALLPTALKVLDNSSLEKLVVGSIAEVLPTAKSILFRLFKRGETTPLPH
DPRVIRYDRLIANAGECIVADIDPVNDVALLQYTGGTTGTPKGAMLTHQNLTANARQAQG
IDPHAGEGDDRIIAVLPFFHVFANTCTLNRTVMNGGEMVMLPRFEAVQVLSAVQRTKATS
LPGVPTMYQALLDHPALPNIDFSSLRTCISGGAPLPMEVKQKFEGVTGARLIEGYGLTET
SPIVCANPYEGLNKTGTVGQPVPGTRVKIVSREDPTQPPPEGEPGELMFAGPQIMKGYWN
RPDADAQVFVGEFLRTGDVGEVDDDGYVRIVDRLKDMIAVGGFKVFPSQVESVLYHHESV
KEALVIGVPDRYRGEQPKAFVTLNEGATIDGPGLKDWLNPQLGKHERVCEVEVRASLPKT
LVGKLSRKELVAEERAKAEQAMAQNAAQTGTAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagagaaaagatctggcgcgagcattatcagcaccctacgccgtgggagcag
acgttcccgccgatgtcgatgggggacatggtaacgcagagcgccaccgcccacccgcag
gcccacatgatcgacttcatggggcgcaagttcagctatggcgcgatgatggacgacatc
aggcgcatcgcctgtggtttgcaggccatgggcgtgaagaagggggaccgggtcggtctc
tacctgcccaacaccccccattatgtcgcggcctattatggcgcgctgctggccggcgcg
atcgtcgtcaacttctcccccctctacaccgccgccgaactggagcatcaggtcgaggat
agcggcaccaagatcctgttcaccctgtcggccaaggcactgctgccgaccgcgctcaag
gtgctggacaatagcagcctggaaaagctggtggtcggttcgatcgccgaggtgctgccg
accgccaagagcatcctcttccgcctgttcaagcgcggcgagacgacgccgctgccgcat
gatccgcgcgtcatccgctatgaccggctgatcgccaatgcgggcgaatgcatcgtggcc
gacatcgatccggtcaacgacgtcgcgctgctgcaatataccggcggcaccaccggcacg
cccaagggcgcgatgctgacccaccagaatctgaccgccaatgcgcgccaggcgcagggg
atcgacccgcatgcgggcgagggcgatgaccgcatcatcgcggtgctgcccttcttccac
gtcttcgccaatacctgcacgctgaaccggaccgtgatgaatggcggcgagatggtgatg
ctgccccggttcgaggcggtgcaggtgctctcggccgtccagcggaccaaggcgacgtcg
ctgcccggcgtgccgaccatgtatcaggcgctgctcgatcatccggccctgccgaacatc
gatttctcgtcgctgcgcacctgcatctcgggcggcgcgccgctgccgatggaggtgaag
cagaagttcgagggggtgaccggcgcgcgcctgatcgagggctatggcctcaccgaaacc
agcccgatcgtctgcgccaacccctatgaggggctgaacaagaccggcaccgtcggccag
cccgtgcccggtacccgcgtcaagatcgtcagccgtgaggatccgacccagcccccgcca
gaaggcgagccgggcgaactgatgtttgccggtccgcagatcatgaagggctattggaac
cgaccggatgcggacgcacaggtgttcgtgggcgagttcctgcgcaccggcgatgtcggc
gaggttgatgacgacggctatgtgcggatcgtcgaccggctgaaggacatgatcgccgtc
ggcggcttcaaggtcttcccgagccaggtggaatcggtcctctatcatcatgaatcggtg
aaggaggcgctggtgatcggcgtgcccgatcgctatcgcggcgagcagcccaaggcgttc
gtgaccctgaatgaaggcgcgaccatcgacgggccggggctcaaggactggctcaacccg
caactgggcaagcatgagcgggtctgcgaggtcgaggtgcgggccagcctgcccaagacg
ctggtcggcaagctgtcgcgcaaggaactggtcgccgaagaacgcgccaaggccgaacag
gcgatggcccagaatgcggcgcagactggaaccgcggcctga
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