Sphingobium yanoikuyae: A6768_03305
Help
Entry
A6768_03305 CDS
T05170
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sya03009
]
A6768_03305
Enzymes [BR:
sya01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A6768_03305
Ribosome biogenesis [BR:
sya03009
]
Prokaryotic type
ribosomal protein modification factors
A6768_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ATI83121
UniProt:
A0A084ER96
LinkDB
All DBs
Position
complement(698515..699882)
Genome browser
AA seq
455 aa
AA seq
DB search
MATKIPDAPKIGMVSLGCPKNLVDSERILTKLRSDGYQMSADYAGADVVLVNTCGFLDSA
KEESLEAIGEAMAENGRVIVTGCMGDEADVIRAKFPQVLAVTGAHQYEQVVNAVHDASPP
IPNAFVDLVPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSIRGDLVSRRIDAVLREAEK
LVAAGTKELLVISQDTSAYGVDTRHEPRMWKGREVRAHMTDMARELGQLRTADGVAPWVR
LHYVYPYPHVDHVIPLMAEGLLTPYLDIPFQHASPSVLKAMKRPANEAKVLDRIRKWRDI
CPDIAIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANDLPGAVPEE
VKEERYQRIMEKTAAISAAKLQAKVGRVMPVIIDEVGEPDEEDGSIGATARSQADAPEID
GNVFLRDVGEGRKAGDMFDVLIEDADDHDLYGVPA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaatcccagacgcgccgaagatcggcatggtttcgctcggctgtccgaag
aacctggtcgattccgagcgcatcctgaccaagctgcgttccgacggctatcagatgtcc
gccgactatgccggcgccgacgtcgtgctggtcaacacctgcggcttcctcgattccgcc
aaggaggaatcgctcgaagcgatcggcgaggccatggccgaaaatggccgcgtcatcgtc
accggttgcatgggcgacgaagcggacgtgatccgcgcgaaattcccgcaggtgctggcc
gtcaccggcgcgcatcaatatgagcaggtggtcaatgcggtgcatgacgcgtcgccgccc
atccccaacgcctttgtcgacctggtgcccgaaggcgggctgaagctcaccccgcgccat
tacagctatctgaagatttcagagggctgcaaccaccgttgctccttctgcatcatcccc
tcgatccgcggcgacctggtgtcgcggcgcatcgacgcggtgctgcgcgaggcggaaaag
ctggtcgcggccggcaccaaggaattgctggtcatcagccaggatacctcggcctatggc
gtcgatacgcgccatgagccgcgcatgtggaagggccgcgaggtccgcgcccatatgacc
gacatggcgcgcgaactgggccagctgcgcacggcggacggcgtcgccccctgggtgcgc
ctccattatgtctacccctatccccatgtcgaccatgtcatcccgctgatggccgaaggg
ctgctgacgccctatctcgacattcccttccagcatgcttcgcccagcgtcttgaaggcg
atgaagcgcccggccaatgaagccaaggtgctggaccgcatccgcaagtggcgcgatatc
tgcccggacatcgcgatccgttccagcttcgtcgtcggcttccccggcgagaccgaggcg
gacttccagtatctgctcgactggctggacgaagcgcagctcgaccgcgtcggcgccttc
cgcttcgagccggtcgagggcgctgccgccaatgacctgccgggcgccgtgcccgaagag
gtcaaggaagaacgctatcagcggatcatggaaaagaccgccgcgatcagcgccgccaag
ctgcaggccaaggtcggccgggtcatgccggtgatcatcgatgaggttggcgagcccgac
gaggaagatggcagcatcggcgccaccgcgcgcagccaggctgacgcgccggaaatcgac
ggcaatgtcttcctgcgggacgtcggcgaaggccgcaaggcgggcgacatgttcgacgtg
ctgatcgaggatgccgacgatcacgacctgtacggcgtgccggcctga
DBGET
integrated database retrieval system
