Sphingobium yanoikuyae: A6768_03880
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Entry
A6768_03880 CDS
T05170
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00220
Arginine biosynthesis
sya00240
Pyrimidine metabolism
sya00250
Alanine, aspartate and glutamate metabolism
sya01100
Metabolic pathways
sya01110
Biosynthesis of secondary metabolites
sya01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
A6768_03880
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A6768_03880
00220 Arginine biosynthesis
A6768_03880
Enzymes [BR:
sya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
A6768_03880
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ATI79239
UniProt:
A0A177JX07
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All DBs
Position
827737..831072
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AA seq
1111 aa
AA seq
DB search
MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLEKYGVQMIGADA
EAIDKAEDRIKFRDAMDKIGLESARSRIAHTMEEAMEALEFTGLPSIIRPSFTMGGTGGG
IAYNRDEFMNIVRGGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNSIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASLAVLREIGVETGGSNVQFAVNPKDGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLSGFNQVDHLVGAPKD
DIIAALAQPTPDRLLVAAQALREGLTVAEIHNIAKFDPWFLERLKEIVEAENEVLEHGLP
RDADGMRRLKAMGFSDKRLAWLALKSANLRGNERGVARGSGLIHDAVVAMTGGVTEDEVR
SLRHKLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPIFGEPENEAQPSDRKKVVILGGGP
NRIGQGIEFDYCCVHACFALSEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LHVEMSKGTLAGVLVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALIDKL
KLRQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYITTAVQVS
GDSPVLIDQYLRDAVEVDVDALCDGDDVVVAGVLQHIEEAGVHSGDSACSLPPYSLSDEV
IAEIERQTEVLARALSVRGLMNIQFAVKDGIVYLIEVNPRASRTVPFVAKAIGTPIAKIA
SRVMAGEKIKDLPKIDRNAIDHVAVKEAVFPFNRFPGVDPVLSPEMKSTGEVMGIDSNFA
TAFAKAQLGAGTVLPTSGTVFVSVKDSDKPVILPAVQKLAGMGFTIIATGGTATYLEGQG
IAVEHVNKVAEGRPHIVDRITDGDVQLIFNTTEGWQSLKDSKAIRTSALRAKIASFTTAT
ASVAAADAIEALRDRALEVRSLQSYYPGSHA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcacagacatctcctccatcctcatcatcggcgctggtccgatcatcatc
ggccaggcgtgcgagttcgattattcgggcacgcaggcggtcaaggcgctgaaggaagag
ggctatcgcatcatcctggtgaattccaacccggccaccatcatgaccgacccggaattt
gccgacgcgacctatgtcgagccgatcacgcccgaaatcgtggcgaagatcatcgagaag
gagcggcccgatgcggtgctgccgacgatgggtggccagaccgcgctgaacaccgcgctg
gcgctgttcaacgacggcacgctggagaaatatggcgtccagatgatcggcgccgacgct
gaagccatcgacaaggcggaggaccggatcaagttccgcgatgccatggacaagatcggc
ctggaatcggcccgctcgcgcatcgcccacaccatggaagaggcgatggaagcgctggag
ttcaccggccttccctcgatcatccgtcccagcttcaccatgggcggcaccggcggcggc
attgcctataatcgcgacgagttcatgaacatcgtccgcggcggcctagatgcctcgccg
accaccgaagtcctgatcgaggaatcgctcctcggctggaaggaatatgagatggaagtc
gtgcgcgatcgcaacgacaattccatcatcatctgttcgatcgagaatgtcgatccgatg
ggcgtccataccggcgactccatcaccgtcgcgccggcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgccagcctggcggtgctgcgcgagatcggcgtcgaaaccggc
ggttccaacgtccagttcgcggtcaatcccaaggatggccgcctggtcgtcatcgagatg
aacccgcgcgtgtcgcgctcttcggcgctcgcgtcgaaggcgaccggcttcccgatcgcc
aaggtcgctgcgaagctggccgtcggctacacgctcgacgagatcgagaatgacattacc
ggcgcgaccccggcctcgttcgagccgaccatcgactatgtcgtgaccaagatcccgcgc
ttcgcctttgaaaagttcaagggcgccgagccgctgctgggcaccgccatgaagtcggtc
ggcgaagtcatggcgatcggccgcaacatccatgaatcgatgcagaaggcgctgcgcggt
ctggaaaccggcctgtccggcttcaaccaggtcgatcatctggtcggcgcgcccaaggac
gacatcatcgccgccctggcacagccgacgcccgatcgtctgctggtcgccgcgcaagcc
cttcgtgaaggtctgaccgtcgcggaaatccacaatatcgccaagttcgacccctggttc
ctggagcgcctgaaggaaatcgtcgaggccgagaatgaggtgctggaacatggcctgccg
cgcgatgcggatggcatgcgccggctcaaggccatgggcttttccgacaagcgtctcgcc
tggctggcgctcaagtccgccaatctgcgcggcaatgagcgcggcgtcgcgcgcggcagc
ggcctgatccacgatgctgtcgtcgccatgaccggcggcgtgaccgaggatgaagtgcgc
agcctgcgccacaagctgggtgtgcgtccggtgttcaagcgcatcgacacctgcgccgcc
gagttcgaggcgaagacgccctacatgtattcgacctatgaagccccgatcttcggtgag
ccggagaatgaggcgcagcccagcgatcgcaagaaggtcgtcatcctgggcggtggtccc
aaccgcatcggtcagggcatcgagttcgactattgctgcgtccatgcctgctttgcgctg
agcgaagccggctatgagacgatcatggtcaactgcaacccggaaaccgtgtcgaccgac
tatgacacgtccgaccgcctctatttcgagccgctgacggccgaagacgtgctggaaatc
ctgcatgtcgaaatgtcgaaggggacgctggccggcgtgctggtgcagtttggcggccag
acgccgctcaagctcgcgcaggcgctggaagatgccggcatcccgatcctgggcactagc
ccggacgcgatcgacctggccgaggatcgcgagcgtttcgctgcgctgatcgacaagctg
aagctgcgccagccggccaacggcattgcccgcagccgcgaggaggcgatcgcggtcgcc
aatcgtatcggctatccggttctgatgcgtccttcctacgtccttggcggccgcgccatg
gaaatcgtcgacggccaggcccagctcgaagaatatatcaccaccgccgtgcaggtgtcg
ggcgactctccggtgctgatcgaccagtatctgcgtgatgcggtcgaggtggacgtcgac
gcgctgtgtgacggcgacgatgtggtcgtcgccggcgtgttgcagcatattgaggaagcc
ggcgttcactccggtgactcggcctgctcgctgccgccctacagcctgtcggacgaggtg
attgccgagatcgagcgtcagaccgaagtgctggcccgtgccctgtcggtccgtggcctg
atgaacatccagttcgcggtcaaggatggcattgtctatctgatcgaggtcaatccgcgc
gccagccggaccgtgcccttcgtcgccaaggcgatcggcaccccgatcgccaagatcgcc
tcgcgcgtcatggccggtgagaagatcaaggatctgcccaagatcgatcgcaacgcgatc
gaccatgtcgcggtcaaggaagccgtcttcccgttcaaccgcttcccgggcgtcgacccc
gtgctctcgccggaaatgaagagcaccggcgaagtcatgggcatcgacagcaatttcgcc
actgccttcgccaaggcgcagctgggtgcgggcaccgtgctgccgaccagcggcaccgtc
ttcgtgtcggtcaaggacagcgacaagccggtgatcctgccagcggtgcagaagctggcg
ggcatgggtttcaccatcatcgcgaccggcggcaccgccacctatctggaagggcagggg
atcgccgtcgagcatgtgaacaaggtggccgaaggccgtccgcacatcgtcgaccggatc
accgatggcgacgtgcagctgatcttcaacaccaccgaaggctggcagtccctgaaggac
agcaaggcgatccgcaccagtgctctacgcgcaaagattgcaagtttcaccaccgcgacc
gccagcgtcgctgcggcggacgcaatcgaggctttgcgggaccgcgcccttgaagtgcgc
tcgctccagtcctattatcctgggtcgcacgcctga
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