Sphingobium yanoikuyae: A6768_05960
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Entry
A6768_05960 CDS
T05170
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sya02000
]
A6768_05960
Transporters [BR:
sya02000
]
Other transporters
Pores ion channels [TC:
1
]
A6768_05960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF4799
Motif
Other DBs
NCBI-ProteinID:
ATI79618
UniProt:
A0A291MXH6
LinkDB
All DBs
Position
1266677..1269682
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AA seq
1001 aa
AA seq
DB search
MSKHKIFASSLAIGASIVAMTGSALAQDAAAPAPAPEQAAEQGSAAPVSTSDIVVTGSRI
VRDGYTAPTPVTVATTEELSRTTPSSIPDALNKLPQFSNSLSPSKSASNFSNAPIHGNVL
NLRGLGTPSANPKGPLRTLILFDGMRVSPTEYIGTIDTNVLPQLLMQRVDVVTGGASAQW
GSDAVAGVVNFVLDKKFTGIKGVAQAGISDEGDNANQRLGLAVGQDFAGGRGHILLSGEY
SNNEGMLRSDRDYATKGYSYVGSVVGCTKLASEPASVCAPGGARNPYTIGSNILISALAP
NGRITASSVAGNPYVGQVINNDGTTRPFNTGTAVGTTGFQSGGDGYQIPTTGAAVIPLTT
YQAFGRLSYDLTDDINAFVQGSWSRSDLEYSTQVNALVPASQGVTIYKGNPYLSSALNSA
LTSATDSYTVGQYDAGQPTAIAKERTDYWMVNAGFTGKLGGLDWSATYSHGDSKHILANS
GLYDSKKLYAAADAVVDPSTGQITCRVLLDPTYASQYAGCKPIDVLHGDPSKSTPEGYAY
ATGTSRYRASIRQDSFAVNLSGSLFDLPAGPVDFAVGAEYRKQTLNLTSNADPSLLDTAA
ERSAYFAGLRGVPATTNFYWLTNVGTAHGSLNVKEAYAELAVPILKDKPFFRELSINGAG
RITDYSTSGTVETWKVGATWKPVDDLLLRATLSRDIRAPNLFELYSGAQSGIGIVNDLQT
ADGSYGSGLNQNVNTVTSGNANLKPEKAKTLTIGGVLTPSFFPGFSLSVDYYKIKVTGLI
DTLSSQQIITNCYNAGGSGVAECGLIDRATPTSLPSLVHIVPANIAFLKTAGIDFDASYR
TALGDGALSLRLYMNYLDKFDAQQYAGAPIAHYAGVSVVGSNPAGFPRWRGNFSIDYSNG
PFGITLSEQYIHKMRLDIPGGPVPIEFVDDKVKAVWYTDLAMRFTVPQGNGNFELFANVN
NLFDKQPPIIPGTVPGVNLPTNIAVYDFIGRAFTAGVRFKF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacaagatttttgcgtcgtcgctggcgatcggcgccagcatcgtcgcgatg
acgggcagcgcgctggcgcaggatgcggcggcgcccgcaccggcaccggagcaggccgcc
gagcagggtagtgccgcaccggtcagcacatccgacatcgtcgtgaccggctcgcgcatc
gtgcgcgatggctataccgcgccgacgccggtgacggtcgccacgaccgaggaattgtcg
cgcacgacgccgtcgagcattccggacgcgctcaacaagctgccgcaattctccaattcg
ctgagtccttccaagtcggcgtcgaatttctcgaacgcgccgatccacggcaatgtgctc
aacctgcgcggcctgggcacgcccagcgccaatcccaaggggccgctgcgcacgctgatc
ctgttcgacggcatgcgcgtgtcgccgaccgaatatatcggcacgatcgacaccaatgtg
ctgccgcagctgctgatgcagcgggtcgacgtggtgaccggcggtgcctcggcccaatgg
ggctctgacgcggtcgcgggtgtcgtcaacttcgtgctcgacaagaaattcaccggcatc
aagggcgtcgcccaggcgggcatttccgacgagggcgacaatgccaaccagcgcctcggc
ctggcggtcggccaggattttgccggcggacgcggccatatcctgctgagcggcgaatat
tccaacaatgaaggcatgctgcgcagcgatcgcgactatgcgaccaagggctatagctat
gtcggcagcgtcgtgggctgcaccaagctggcgagcgagccggcgtcggtctgtgcgccc
ggcggcgcgcgcaacccctatacgatcgggtcgaacatcctgatttcggcgctcgccccc
aatggccgcatcactgcgtccagcgtggcaggcaatccctatgtcgggcaggtcatcaat
aatgatggcacaacgcgcccgttcaacaccggcacggcggtcggcacgaccggctttcag
tcgggtggcgacggttaccagatcccgaccaccggcgcggcggtcatcccgctgaccacc
tatcaggcgttcggtcgtctgagctatgacctgaccgacgatatcaacgccttcgtccag
gggagctggtcacgctcggacctggaatattcgacccaggtgaatgcgctggttcccgcg
tcgcagggcgtcaccatctacaagggcaatccctatctgtcgtccgcgctgaattcggcg
ctgacgtccgcgacggacagctacacggtcggccaatatgatgccggccagccgacggcc
atcgccaaggaacgtaccgattactggatggtcaatgccggcttcaccggcaagctgggc
gggctagactggagcgccacctactcgcatggcgactccaagcacatcctggccaattcc
ggcctttatgacagcaagaagctctatgcggcggccgacgcggtggtcgatcccagcacc
ggccagatcacctgccgtgtgctgctcgatccgacctatgccagccaatatgcgggctgc
aagccgatcgacgtgctgcatggcgacccgtccaagtcgacgcccgaaggctatgcctat
gccaccggcacgtcgcgctaccgcgcgagcatccgccaggacagctttgcggtgaacctg
agtggcagcctgttcgacttgccggcagggccggtcgacttcgcggtcggcgcggaatat
cgcaagcagacgctgaacctcaccagcaatgccgatccctcgctgctcgacacggcggct
gagcgcagtgcctatttcgccggactgcgcggggtgccggccaccaccaacttctactgg
ctgaccaatgtcggcacggcgcatggcagcctgaacgtcaaagaagcctatgccgaactg
gcggtcccgatcctgaaggacaagcccttcttccgggaactgagcatcaacggcgcgggc
cgcatcaccgactattcgacgtcgggtacggtcgagacctggaaggtcggcgcgacctgg
aagccggtcgatgacctgctgctgcgtgccaccctgtcgcgcgacatccgtgcgcccaac
ctgttcgaactctattcgggggcgcagagtggcatcggcatcgtcaatgatctgcagacg
gccgatggcagctatggcagcggcctcaaccagaatgtgaacacggtcaccagcggcaac
gccaatctgaagccggaaaaggccaagacgctgacgatcggcggcgtgctgacgccgtcc
ttcttccccggcttctcgctgtcggtcgactattacaagatcaaggtcactggcctgatc
gatacgctctcgtcacagcagatcatcaccaactgctataatgcgggcggatcgggcgtg
gccgaatgcggcctgatcgatcgggcgacgccgaccagcctgccctcgctggtgcatatc
gtgccggccaacatcgccttcctgaagaccgccggcatcgatttcgacgccagctatcgc
accgcgctgggcgacggggcgctcagcctgcggctctacatgaactatctcgacaagttc
gatgcccagcaatatgcgggcgcgccgatcgcccattatgcgggcgtcagcgtggtcggt
agcaacccggccggcttcccgcgctggcgcggcaatttctcgatcgactacagcaacggg
ccgttcggcatcaccctgtccgaacaatatattcacaagatgcggctggatattcccggt
gggccggtgccgatcgagttcgtcgacgataaggtgaaggcggtctggtataccgacctg
gccatgcgcttcaccgtgccccaggggaatggcaatttcgagctgttcgccaacgtcaac
aatctgttcgacaagcagccgccgatcattccgggcaccgtgccgggggtgaacctgccg
accaatatcgcggtctacgactttatcggccgtgccttcacggcgggcgtccgcttcaaa
ttctga
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