Sphingobium yanoikuyae: A6768_05980
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Entry
A6768_05980 CDS
T05170
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00550
Peptidoglycan biosynthesis
sya01100
Metabolic pathways
sya01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A6768_05980 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A6768_05980 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sya01011
]
A6768_05980 (mrdA)
Enzymes [BR:
sya01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A6768_05980 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sya01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
A6768_05980 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
EABR
Motif
Other DBs
NCBI-ProteinID:
ATI83160
UniProt:
A0A291N7Q9
LinkDB
All DBs
Position
complement(1271304..1273403)
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AA seq
699 aa
AA seq
DB search
MKFPTPKRKIVTEATQSFTFSRRAMVVGGLQGAIGALLVGRMGWISIAENEKYQLLSESN
RVNLTLIPPRRGWIVDRNGRPLANNRTDFRVDLIPQRIVDAEATVGHLAQLLSLQPDDVD
RIKEELDKSAGFRPVQVADKLTYDQFAAVSVRLTDLPGVAPSQGFSRHYPAGATVGHLLG
YVGAATAEDYKKRKDPLLITPGFKVGKDGLERAYDEHLTGKPGAKRVEVTARGKIVRELT
TRPDTPGNPIKLTIDAGLQEYAGRRLATQSGAVVVIDCHNGDVLACASMPSFDPNSFSDG
ISHLEWEMLSKDDHVPLRNKVLQGLYPPGSTVKPMVALALLEAGVSPAETVSCGGAIRVG
NTLFHCHKKRGHGPLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQRFDLPFPS
QSYGTVPDPAWKLKKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFL
HGAARPEPALVGVPEEHLVTIRDAMSAVVNGGGTGGAARMSIPNVLIAGKTGTAQVRRIT
MAERAGGVRGNAGLPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHTIRNEDAPMIASDT
MSYLFDPQKAMEKLVTLEKGWGGTPAERQARQMAAFRLAKAIEKGQAPPPAAAANGSEAA
NATAPTASTPAASPPPPAPSSAEPDDGDDLPAPPGPGNP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcccgacgcccaagcgcaagatcgtcaccgaagccacccagagtttcaccttc
agccgccgggccatggtggtcggcgggctgcagggcgcgatcggcgcgctactggtcggc
cgcatgggctggatcagcattgccgagaacgagaaatatcagctcctgtcggaaagcaat
cgcgtcaacctgacgctgatcccgccccggcgcggctggatcgtcgatcgcaacggccgg
ccgctggccaataaccgcaccgatttccgcgtcgacctgatcccgcagcggatcgtcgat
gccgaggcgacggtgggccatctggcgcaactcctctcgctccaacccgacgatgtcgat
cggatcaaggaggaactggacaagtcggccggcttccgcccggtccaggtcgccgacaag
ctgacctatgaccagttcgccgccgtatccgtccgcctgaccgacctgcccggcgtcgcg
ccgagccagggcttttcgcgccattatccggccggcgccacggtcggccatctgctcggc
tatgtcggagcggccacggcagaagactataagaagcgcaaggatccgctgctcatcacg
ccgggcttcaaggtcggcaaggatgggctggagcgcgcctatgacgagcatctgaccggc
aagcccggcgccaagcgggtggaagtcaccgcgcgcggcaagatcgtgcgggaactgacc
acccgcccggacacgcccggcaacccgatcaagctgacgatcgacgcgggcctgcaggaa
tatgccggccggcgcctcgccacccagagcggcgcggttgtggtgatcgactgccataat
ggcgacgtgctggcctgcgcatcgatgcccagcttcgaccccaacagcttttccgacggc
atcagccatctggaatgggaaatgctgtcgaaggacgaccatgtcccgctgcgcaacaag
gtgctgcagggcctctatccgcccggatcgacggtcaagccgatggtggcactggcattg
ctggaggcgggcgtatcgccggccgagacggtcagttgcggcggcgcgatccgcgtcggc
aacacattgttccactgccacaagaagcgcggccacggtccgctcaacatgcgcggcgca
atcgcccagagctgcgacatctatttctaccagatggcccagcggatcggcatggaccgc
atcgccagcatggcccggcgcgtcggcatgggccagcgctttgacctgcccttccccagt
cagagctatggcacggtcccagacccggcgtggaagctcaagaaatataaccagaaatgg
caggtatatgacaccgtcaacgcgaccattggccagggttatatgctgatcaacccgcta
cagatggcggtgatggcagcgcggctggcgaccggacgacaattgatgcccaatttcctg
catggtgcggcccggcccgaaccggcactggtcggcgtgccagaggagcatctggtgacg
atccgcgacgcgatgagcgcggtggtcaatggcggcggcaccggcggcgcggcacggatg
agcattcccaatgtgctgatcgccggcaagaccggcaccgcgcaggtgcgtcgcatcacc
atggcggagcgcgccggcggcgtgcgcggcaatgccggcctgcccttcaagctgcgcgac
cacgccctattccagggcttcgcaccgttcgacaatccccgttatgccatcgcctgcatc
atcgaacatggcggccacaccatccgcaacgaggatgcgccgatgatcgccagcgatacc
atgtcctatctgttcgatccgcagaaggcgatggagaagctggtcacgctggaaaagggc
tggggcggcaccccggccgaacgccaggcccgtcagatggccgctttccgcctggccaag
gcgatcgagaagggacaggcgccgccgccggccgccgccgccaatggcagcgaggccgcc
aatgcgaccgcgcccaccgccagcacgcccgccgccagcccgccaccaccggccccgtca
tcggctgagcccgatgatggcgacgacctgcccgcgccccccggccctggaaacccgtaa
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