Sphingobium yanoikuyae: A6768_08655
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Entry
A6768_08655 CDS
T05170
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_08655 (addB)
Enzymes [BR:
sya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6768_08655 (addB)
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A6768_08655 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATI80068
UniProt:
A0A291MYU5
LinkDB
All DBs
Position
complement(1869003..1871981)
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AA seq
992 aa
AA seq
DB search
MGDRAKPALYTIPAHRAFADALVAGILAQQGSDPVRLAQGMILLPSNRAVRAVSDAFVRR
AEGGLLLPRLVALGDPELGEEVGGALDPLWEGDAVPAAIPPMRRQMILARMVQDAGGAAD
AGQALQLGQALGAVLDQMQVERVPLDALSKLDLIEGLSSHWEKSLDLFSILIARWPAELA
RLGFIDLADRRNRLFDRVAARWAEAPPPGFIVAAGISATAPAIAGLLRRIAELPNGQVVF
AGLDQNLDEDAWTAIGPFPPDPVTGRSAAGHETHPQYTLKRLLDRMSASREDVAQWRWGS
EHDARAVRGRNISNAMLPPRLTSRWRDLKTADRSLAGIEALEVATPGEEAQAIAIALREA
LETPERTAALVTPDRQLAVRVSAHLRRWGIEADDSAGQPLSRLPPGTLLIAMAEAAAERF
APVALLTLLKHPLVMRGEMRLPWLEGVRQLDLLLRGPRPQAGLRGIDLLLEPREGEDRQK
DLRAQARAWWPWARDLLEPLEAAFALAPDLAGQLAAVREQAGALTNDALWAGHQGHAAAD
LFAEMEAAATEGPRQADIRSLPALLDHMLGGVSVRPPQGGHPRIAILGLVEAQLVQADLM
ILGGLNEGSWPGLPSPDPWLAPRIRRELGLPGLETRIGLAAHDFASALGAPHVLITRARR
GSGGPAIASRFWLRLKAMAGPQWKTADRYRLLADALDLPPSHRPSARPAPVPPLATRPTR
IPVTDVDRLKADPFAFYARRILKLNRLDPVDADAGPAWRGTVVHEILEHWARGGSRDPAD
LEARARAMFARPDVHPLLRALWQPRLIEAIRWIAAEVAKDQAAGRHILAVETEGKAEIAG
VLLTGKADRIDRMPDGSIGIVDYKTGKPPSARQVRGGYALQLGLLGLIAESADGAFPGVA
GARVAGSFEYWSLAKKGDAFGYRESPVDPMGKRDKIVTADFTAFVYDQFRDAAETWLTGA
APFAAQVNPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcgggccaagccggcgctgtacaccatcccggcgcatcgcgccttcgccgat
gcgctggtcgccggcatattggcgcagcaggggagcgatcccgtccgcctggcgcagggc
atgattctgctccccagcaatcgcgccgtccgggccgtcagcgacgcctttgtccgccgg
gccgaaggcggcctgctgctgccccgtctggtcgcgctgggcgatcccgaactcggtgag
gaagtcggcggcgcgctcgatccgctttgggagggcgatgccgttcccgcggccatcccg
ccgatgcggcgacagatgatcctggcgcgcatggtgcaggatgcgggcggcgcagccgat
gccggccaggcgctgcaactggggcaggcgctgggcgcagtgctcgaccagatgcaggtg
gaacgggtgccgctcgatgcgctgtcgaagctcgacttgatcgaggggctgtcgagccat
tgggaaaaatcgctcgacctcttctccatcctgatcgcgcgttggccggcggaactggcg
cggctgggcttcatagaccttgcggatcgccgcaatcgcctgttcgatcgggtcgctgca
cgttgggcggaggccccgccgccgggcttcatcgtcgcggccggcatcagcgccaccgcg
ccggcgatcgcggggctgctgcggcggatcgccgaactgcccaatggacaggtggtattc
gccgggctcgaccagaatctggatgaggatgcctggacggcgatcggtccattcccgccc
gatcccgtcaccggccgcagcgcagccgggcatgagacccatccccaatatacgctgaag
cgtctgctcgaccgcatgagcgcgagccgagaggatgtcgcccaatggcgctggggcagc
gagcatgatgcccgcgccgtgcgcggccgcaatatttccaacgcgatgctgccgccgcgc
ctgaccagccgctggcgcgacctcaagaccgccgaccgctcgctcgccgggatcgaggcg
ctggaggtggcgacgccgggcgaggaagcgcaggccattgccattgcgctgcgtgaggcg
ctggagacgcccgaacgcaccgccgcgctggtgacgcctgaccggcagctcgccgtgcgc
gtctctgcccatctgcgccgctggggcatagaggctgacgattccgccggtcagccgctc
tcccgcctgccgcccggcaccctgctgatcgcgatggcggaggcggcagccgagcgtttt
gcgccggtcgcgctgctgaccctgctcaagcatccgctggtgatgcgcggcgagatgcgc
ctgccctggctggagggcgtgcgccagctcgacctgctgctgcgggggccgcgcccgcag
gcggggctgcggggcatcgacctgctgctggagccgcgcgagggcgaggaccgacagaag
gatttgcgtgcgcaggcccgcgcctggtggccctgggcacgcgatctgctcgaaccgctg
gaggccgccttcgcgctcgcgcccgatctggccgggcaattggcggcggtgcgcgaacag
gccggcgcgctcaccaatgacgcgctctgggccggccatcagggtcatgccgctgccgac
ctgttcgccgagatggaggcggctgccaccgaagggccgcgtcaggccgatatccgatcg
ctgccggccttgctcgaccatatgctgggcggcgtgtcagtgcgcccgccacagggcggg
catccgcgcattgccatattgggtctggtcgaggcgcagctggtgcaggcggacctgatg
atcctgggcggcctcaacgaaggcagctggccgggcctgccgtcgcctgatccctggctg
gcgccgcgcatccgccgcgaactgggtctgccgggcctcgaaacccggatcggccttgcc
gcgcatgatttcgcgagcgcgctgggtgccccgcatgtcctcatcacccgtgcccggcgc
ggcagcggtgggccggcgatcgcctcgcgcttctggctgcggctgaaggcgatggcgggg
ccgcaatggaaaaccgccgatcgctatcgcctgttggcggacgcgctggacctgccaccc
agccaccggccgtccgcgcgccccgcgccggtgccgccgctcgccacccgtccgacccgc
attccggttaccgatgttgaccggctgaaggccgatccattcgctttttatgcccgacgc
atcctgaagctcaatcgcctcgatccggtcgatgccgatgccggcccggcctggcgcggc
acggtcgtgcatgagatattggagcattgggcgcggggcggcagccgcgatccggccgat
ctggaggcgcgtgcccgcgccatgttcgcccggcccgatgtccatccgctgctccgggcc
ctgtggcagccgcgcctcattgaggcgatccgctggatcgcggccgaagtggcgaaggat
caggccgcgggccgccatatcctggcggtggagacggaaggcaaggcggagattgccggc
gtgctgctgaccggcaaggccgaccggatcgaccggatgcccgacggcagcatcggcatc
gtcgactacaagaccggcaagccgcccagcgcgcgacaggtgcgtggcggctatgcgttg
caattgggcctgctcggtttgattgcggaatccgccgatggcgcctttcccggcgttgcc
ggcgcgcgggtggcgggcagtttcgaatattggtcgctggccaagaagggcgacgctttc
ggctatcgcgagagtccggtcgatccgatgggcaagcgggacaagatcgtcaccgccgat
ttcaccgccttcgtctacgaccagttccgcgacgcagccgaaacttggctgaccggcgcc
gcgcccttcgccgcgcaggtcaatccggaagtggccaattatggcgattatgaccagctg
atgcggctggaggaatggtatgggcgcgacgatggctaa
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