Sphingobium yanoikuyae: A6768_10575
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Entry
A6768_10575 CDS
T05170
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sya03021
]
A6768_10575 (rpoH)
Transcription machinery [BR:
sya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A6768_10575 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARA70
Sigma70_r3
Caudo_TAP
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ATI80401
UniProt:
A0A085K169
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All DBs
Position
2292797..2293711
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AA seq
304 aa
AA seq
DB search
MANRSNVPAVPALGGEASLNRYLSEIRKFPLLTPEQEYMLAKRYEEHQDPEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEAERGFRLATYAMWWIRASIQEFI
LRSWSLVKMGTTASQKKLFFNLRRMKNNIEAFEDGDLRPEDVTKIATDLGVSEDDVVSMN
RRMAMGGDTSLNVPMREDGDGQWQDWLQDTDPLQDERVAEEQERTQRHEMLVEAMTDLND
REKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGGKLEKMAR
FAAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcggagcaatgtccccgcggttccggcgctgggcggtgaagccagcctcaac
cgctatctgtcggaaattcgcaagtttccgctgctgacccccgagcaggaatatatgctc
gcgaagcgctacgaggaacatcaggatcccgaggcggcggcgcaactcgtcacctctcac
ctgcgcctcgtggcgaagatcgccatgggctatcgcggctatggcctgccggtcagcgag
ctgatcagcgaaggaaatatcggcctgatgcagggcgtgaagaagttcgaggccgaacgt
ggcttccgcctggcaacttacgccatgtggtggatccgcgcgtcgatccaggaattcatc
ctgcgcagctggagcctggtcaagatgggcactaccgcgtcgcagaagaagctgttcttc
aacctgcgccggatgaagaataacatcgaagcgtttgaggatggcgatctgcgccccgag
gacgtgaccaagatcgcgaccgatctgggcgtgtcggaagatgacgtggtgtcgatgaac
cgtcgcatggcgatgggcggcgatacctcgctcaacgtgccgatgcgcgaggatggcgat
ggccagtggcaggattggctgcaagacaccgatccgctgcaggacgaacgcgtcgccgag
gagcaggaacgcacccagcgtcacgagatgctggtcgaggcgatgaccgacctcaacgac
cgcgagaagcatatcctggccgagcgtcgcctggccgaggagcccaagacccttgaggaa
ctgagccaggtctatggcgtgtcgcgcgagcgcgtccgccagatcgaggttcgcgccttc
gagaaactgcagaaggcgatgatgcgcatcgcgggcggcaagctggaaaagatggcacgc
ttcgccgccgcctga
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