Sphingobium yanoikuyae: A6768_13235
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Entry
A6768_13235 CDS
T05170
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sya03032
]
A6768_13235
03036 Chromosome and associated proteins [BR:
sya03036
]
A6768_13235
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_13235
DNA replication proteins [BR:
sya03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A6768_13235
Chromosome and associated proteins [BR:
sya03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A6768_13235
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A6768_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Phage_cement_2
HU-CCDC81_euk_2
Cdc6_lid
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ATI80848
UniProt:
A0A291N132
LinkDB
All DBs
Position
2887576..2887851
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDLADLLANETGATKADARKAVDLIFLAIADAAAKGEEVSLNGFGKFKVKDMPAREG
RNPATGAALTIAASRKISFTVAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagcgaccttgccgatcttctcgccaatgaaaccggcgccaccaaggccgat
gcccgcaaggcggtcgacctcattttcctggccatcgccgatgccgccgccaagggcgag
gaagtgagccttaacggctttggcaagttcaaggtgaaggacatgccggcgcgcgaaggc
cgcaatcctgcgaccggcgccgccttgaccatcgctgcctcgcgcaagatcagcttcaca
gtcgcgaaggccgtgaaggacaagctcaacggctga
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integrated database retrieval system
