KEGG   Sphingobium yanoikuyae: A6768_13295
Entry
A6768_13295       CDS       T05170                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sya  Sphingobium yanoikuyae
Pathway
sya03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A6768_13295 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sya03400]
    A6768_13295 (xth)
Enzymes [BR:sya01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     A6768_13295 (xth)
DNA repair and recombination proteins [BR:sya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     A6768_13295 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ATI80857
UniProt: A0A291N0I0
LinkDB
Position
complement(2901073..2901834)
AA seq 253 aa
MKIATYNLKGINGRVALLLRWLALAEPDVVCLQEFNPSDERFPERAILDLGYEAIWLGQK
SWHGVAILSRVGEIHDTRRGLPGEPEDVQSRYIGAAVDGVLIVGLYLPNGNPRPGPKFDY
NLRWSDWLHDHLSTLVALDSPVVVAGHFNVMPTDFDVYVPDHWRDDALFAAEVREAYARL
LELGWTDALRHLHPDERIYTFGKYWRNSFERNAGLRIDHDLLNDEAVTRLISAEVDRRTR
GRGQDQRPCAGYH
NT seq 762 nt   +upstreamnt  +downstreamnt
atgaagatcgcaacctacaatctcaagggcatcaacgggcgggttgcgctgcttttgcgc
tggctcgcccttgccgagccggacgtggtatgtctgcaggagttcaatccgtctgatgag
cgctttcccgagcgcgctatcctcgaccttggctatgaagcgatttggctggggcaaaaa
agctggcatggtgtggcgatattgagccgggttggcgagattcacgatacgcgccggggg
cttccgggcgaaccggaggatgtgcagagccgctacatcggggccgcagtggacggtgtg
ctgatcgtcggcctctatctcccaaacggcaacccaagacccggtcccaaattcgattat
aacttgcgctggtccgactggctgcatgatcatctttcgacgcttgtggccctggattct
ccggtggtggttgctggccacttcaacgttatgccgaccgatttcgacgtctatgtacct
gatcactggcgcgacgatgcgctgtttgccgccgaagttcgcgaggcttatgcgcggctg
ctagagctggggtggaccgatgcgttgcgccatcttcaccctgacgagcgcatctacacc
ttcgggaaatattggcgcaattcgttcgagcgcaacgcaggccttcggatcgatcacgac
cttttgaacgacgaggcggtgacgcggctgatatcggcggaggtcgatcgccgtacacgc
gggcggggacaggaccagcgaccatgcgccggttatcattaa

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