Sphingobium yanoikuyae: A6768_13565
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Entry
A6768_13565 CDS
T05170
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sya03009
]
A6768_13565
Enzymes [BR:
sya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
A6768_13565
Ribosome biogenesis [BR:
sya03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A6768_13565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATI83319
LinkDB
All DBs
Position
2955099..2956502
Genome browser
AA seq
467 aa
AA seq
DB search
MEPPKKSGPPRRSGPGGPKRPSGPGSRDGADRGTGRGPARSDARSDGRNEGRFDSRSEGR
PGRPAPRGERPDRNGPGEARGNRFGDGRGERGEGRGARPDRSASGEGRAGRFAGNREEGR
GDRPARGRPDRAAQPDRAERPVRSGRPAEGKRPDRTATGDRPARAPFGDRAARPAFGDRP
ARPRPEGRTPGTSYPPRRPGSKKPAAPHVANPHPARAAAETSGKGEPQRIAKLLARAGIA
SRREIERMIEEGRIARDGVTIDTPATLLTSLHGVTVDGDPVAAPAPARLFLFHKPTGFLT
TERDPAGRPTIYDILPDDLPRLMPIGRLDMNTEGLLLLTTDGEFKREMELPSTGVPRTYR
ARAFGEVSQQQLEDLFDGIEIDGIQYGPIEANLERRTGRNQWIEMTLTEGKNREVRRVLE
HFELKVNRLIRTSYGPFELGELAGGAVEEVRQHDLVAFRSSLKKAQK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggaaccgccaaaaaaatctggcccgccgcgccggtcaggtccgggcggtcccaagcgt
ccctccggccccggatcgcgtgacggcgccgatcgcggcactggccgtggccccgcccga
tcggacgcccgatcggatggtcgcaacgaaggtcgttttgacagccgcagcgaaggccgt
ccgggccgccccgccccgcgtggcgaacgccccgatcgcaatggccccggcgaagcccgc
ggcaatcgcttcggcgacggtcgtggtgaacgcggcgaaggtcgcggcgcccgccccgat
cgcagcgcttcgggtgaaggccgtgctggtcgttttgccggaaaccgcgaagaaggccgt
ggcgaccgcccggcccgtggccgccccgaccgcgccgcccagccggatcgcgccgaacgc
cccgtccgcagcggtcgcccggccgaaggcaagcgccccgatcgcaccgccactggagat
cgtcccgcccgcgcgccctttggcgatcgtgccgcccgccccgcttttggtgaccgcccg
gcccgcccgcgccccgaaggccgcacgcccggcacatcctatccgccgcgccgccccggc
agcaagaagccggctgccccccatgtcgccaatccgcacccggcccgcgccgccgcggaa
accagcggcaagggcgaaccccagcgcatcgccaagctgctcgcccgcgccggcatcgcc
tcgcgccgcgagatcgaacggatgatcgaggaaggccgtatcgccagggacggcgtcacg
atcgacacccccgcgacgctgctcacctcgctccatggcgtcaccgtcgacggtgatccg
gtcgccgcgcccgcccccgcgcgcctgttcctgttccacaagccgaccggcttcctcacc
accgagcgcgaccccgccggtcgcccgaccatttacgacatcctgcccgacgacctgccg
cggctgatgccgatcggccgcctcgacatgaataccgaggggctgttgctgctcaccacc
gatggcgagttcaagcgcgagatggaattgccctcgaccggcgtgccgcgcacctatcgc
gcccgcgcctttggcgaggtcagccagcagcagctggaggatctgttcgacggcatcgag
attgacggcatccaatatggtccgatcgaggccaatctggaacggcgcaccggccgcaac
cagtggatcgaaatgaccctgaccgaaggcaagaaccgcgaagtgcggcgcgtgctcgaa
catttcgaactcaaggtcaatcgcctgatccgcaccagctacggcccgttcgaactgggc
gaactggccggcggcgcggtcgaggaagtgcgccagcatgacctggtcgccttccgcagc
agcctgaagaaagcacagaaatga
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