Sphingobium yanoikuyae: A6768_13600
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Entry
A6768_13600 CDS
T05170
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya03420
Nucleotide excision repair
sya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6768_13600
03430 Mismatch repair
A6768_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_13600
Enzymes [BR:
sya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6768_13600
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6768_13600
MMR (mismatch excision repair)
Other MMR factors
A6768_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ATI80909
UniProt:
A0A291N0N9
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All DBs
Position
2959637..2961913
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AA seq
758 aa
AA seq
DB search
MTVPAPSPNDPPYLKGLNEPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLVATQRAW
PSEILAVTFTNKAAREMRERVGRMIGPAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLAGLIDQWKNKGHTPEEVGAGEAEGYAHGKG
QKLYAAYQARLREVNACDFGDLLLHSLTILKRHRDVLEQYQQRFKYIMVDEYQDTNSSQY
LWLRLLAQTRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAVIVRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDVGEKVRVLGVWDGPEEARRVGDEIEAIARAGGSLDEV
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGDKAVEKLHRLARAEGIPLALAAARILDTDELTPQARRSLGAFIGDLARWRD
RAAQLPHAELARQILDESGYTATLQAERSTESAGRLENLSELTRAMEEYETLGAFLEHVS
LVMDNEAQQDEQKLTIMTIHAAKGLEFDNVFLAGWEEGIFPSQRALDEGGLNSLEEERRL
AYVAITRARKRCTILHAANRRIYGQWTSSIPSRFVGELPPEHVDEESSMSGGASLWRANW
SERDDPFANVARGSSRGPGWQRAQTSGQFSREPVRIVEARTSAVSLGNKGRDDVSVGQRV
FHQKFGYGTIAAIEGNKLEIDFETAGRKRVMDSFITLA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcctgccccctctcccaatgacccgccctatctcaagggcctcaacgaaccg
cagcgcgaagctgtactgaccacggagggaccggtgctggtgctggccggcgcgggcacg
ggcaagaccgcagcgctcaccgcccgcctcgcccatctggtcgcgactcagcgtgcctgg
ccatcggaaatcctggccgtgaccttcaccaacaaggcggcacgggaaatgcgcgagcgc
gtcggccggatgatcggcccggcggtcgagggcatgccctggcttggcaccttccacgcg
atcgccgccaagatgctgcgccgccatgccgaactggtgggccttcagtccaatttcacc
atcctcgacaccgatgaccagttgcgcctgatgaagcagctgatccaggcggaggggatt
gacgagaagcgctggcccgcgcgtcagctcgccggcctgatcgaccagtggaagaacaaa
ggccacaccccggaggaagtcggcgccggcgaggcggagggctatgcccatggcaagggt
cagaagctctatgccgcctatcaggcccgcttgcgtgaagtgaatgcctgcgatttcggt
gacttgcttctacactctctcacgatattgaagcgccaccgcgacgtgctggagcaatat
cagcagcgcttcaaatatatcatggtggacgaatatcaggacaccaactccagccagtat
ctctggctgcggctgctcgcccagacccgcaagaatatctgctgcgtcggtgacgacgac
cagtccatctattcatggcgcggcgcagaagtcgccaatatcctgcggttcgaaaaggat
tttccgggtgcggtgatcgtccgcctggaacagaattaccgctccaccccgcatatcctg
ggcgccgcctccggggtgatcgcggaaaatggcaatcgcctgggcaagacattgtggacc
gacatcgacgtcggcgaaaaggtgcgcgtgcttggcgtgtgggacgggccggaggaagcc
cgccgcgtcggcgacgagatcgaggcgatcgcccgcgccggcggctcgctggatgaggtc
gcgatcctcgtccgtgcccagcaccagacccgcgaattcgaagaccgtttcatccagatc
ggcctgccctatcgcatcgtcggcggcttccgcttctatgagcgcgccgaaatccgcgac
gcgctcgcctatctgcgcctcgtcaaccagccggccgacgacctggcgttcgaacgcatc
gtcaacgtgccgaagcgcggcctgggcgacaaggcggtcgagaagctgcaccggctggcg
cgcgcggagggcattcccctcgcccttgctgctgcacgcatcctcgacaccgacgaactg
acgccccaggcgcgccgttcgctcggcgccttcatcggcgacctcgcccgctggcgcgat
cgcgccgcacaactgccccatgccgaactggcgcgccagatcctggacgaaagcggctat
accgccacgctccaggccgaacgttcgaccgagagcgccgggcggctcgaaaatctgagc
gaactcacccgcgcgatggaggaatatgagacgctgggcgccttcctcgaacatgtcagc
ctggtcatggacaatgaggcgcagcaggacgagcagaagctcaccatcatgaccatccac
gccgccaaaggcctggaattcgacaatgtcttcctcgccggctgggaggaaggcatcttc
ccctcgcagcgcgcgctggacgaaggcgggctcaacagcctggaggaggaacggcgcctc
gcctatgtggcgatcacccgcgcgcgcaagcgctgcaccatcctccacgccgccaaccgc
cgcatctatggccagtggaccagctccatcccttcccgcttcgtcggcgaattgccgccc
gaacatgtggatgaggaaagcagcatgtccggcggcgcctcgctctggcgcgccaactgg
tccgaacgggacgatcccttcgccaatgtcgcgcgcggctcgtcgcgggggccgggctgg
cagcgcgcccagaccagcggccagttcagccgcgaacccgtgcgaatcgtcgaagcccgc
acctccgccgtgtcgctcggcaacaagggccgcgacgatgtgtccgtcggccagcgcgtc
ttccaccagaaattcggctatggcacgatcgccgcgatcgagggcaacaagctggaaatc
gacttcgaaaccgccggccgcaagcgggtgatggacagcttcatcacgctggcctga
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