Sphingobium yanoikuyae: A6768_14645
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Entry
A6768_14645 CDS
T05170
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sya
Sphingobium yanoikuyae
Pathway
sya02010
ABC transporters
sya03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A6768_14645
03070 Bacterial secretion system
A6768_14645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sya02000
]
A6768_14645
02044 Secretion system [BR:
sya02044
]
A6768_14645
Transporters [BR:
sya02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
A6768_14645
Secretion system [BR:
sya02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
A6768_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_18
DUF87
AAA_16
AAA_29
Zeta_toxin
nSTAND3
AAA_22
PRK
Motif
Other DBs
NCBI-ProteinID:
ATI81098
UniProt:
A0A291N1S4
LinkDB
All DBs
Position
complement(3186290..3188455)
Genome browser
AA seq
721 aa
AA seq
DB search
MNAATIDPDRKRPIPPDETGLVALATLLAMHYVVVDPQVLRQELGHSNPLDSKDLLRLGK
RQPGVRARIVRADYDRLQRLSLPALAQAANGQWFIMGRIKEHGVLIQRPGHPVETLDRAA
LDEIWSGELILLATRAGTGGEMKRFDISWFIPQIVRYRRLVGEVLLITLCINLLGLAAPL
FFQNVIDKVLVHNTLATLQVLMLGFVLVSFWEVGFGWLRTRLYSETCQKIDVELGVRLFR
HVLRLPLTYFEGRRVGDTVMRVRQLEAIREFLTNASLSVLIDPAFTLVFLLAMWLYSPLL
TGIVLLTIPAYVAVSIMVTGPLRRRLAEKFDRGAANNALLIESISGMQTIKAAAVEPQWN
HRWELQLAAYSTSNQRAINLANNSSQLVQLISKLGAATILFFGAGQVIAGTMTVGALVAF
NMFAQRVSSPVIRMAQLWQDFQQVRLSVAQLGLVLDAPIERIGSSRTTLPSIRGNIRFEG
VRFRYGDEGPWTLENIDLGLPAGGTLGIAGSSGSGKSTLAKLLQRLYLPAAGRILIDDID
IAQIDPTWLRRQIGVVLQENLLFNCTLRENIALSSPIAPLSEVMSAARLAGAHDFIMGLP
LGYDSMIEERGVNLSGGQRQRIAIARALMSKPRILIFDEATSALDAESEEIVQANLKAMA
AGRTVIIIAHRLSAIRDCDSIVTMEQGHIVERGSHEELIARNGRYAKLYRTQTRTGMARA
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcgacgatcgatccagacaggaagcgcccgatccccccggacgaaaccggg
ctggtggcgctcgcgaccctgctcgccatgcactatgtcgtcgtcgatccccaggtattg
cggcaggagctggggcattcaaatccattggacagcaaggatctgctgcgccttggcaag
cgtcagcccggcgtgcgcgcacgcatcgttcgggccgattatgatcgcctgcagcgcctg
tcgctaccggcgctcgcgcaagcggccaatgggcaatggttcatcatgggcaggatcaag
gagcatggcgtcctgatccagcggcccgggcatcctgtggagacgctggatcgggcagcg
ctggatgaaatctggtccggagagctgatcctgcttgccacccgcgccggcaccggcggt
gagatgaagcggttcgacataagctggttcattccccagattgtgcgttaccgccgcctg
gtgggcgaggttctgctcatcaccttgtgcatcaatctcctggggcttgccgcgccgctc
tttttccagaatgtcatcgacaaggtgctggtccataatacgctggccaccctgcaggtg
ctgatgctgggcttcgtgctggtgtccttctgggaagtggggtttggctggttgcggacc
cgcctctattcggagacctgccagaagatcgatgtcgaactgggcgtgcgcctgttccgc
catgtgctgcgcctgccattgacctatttcgaggggcgacgtgtcggcgatacggtgatg
cgcgtccgacagctggaggcgatccgcgaatttctgaccaatgcctcgctgtcggtgctg
atcgatccggcgttcaccctggtcttccttctggccatgtggctttattcgccgctgctg
accgggatcgtgttgctcaccataccggcctatgtcgcggtctcgatcatggtgacaggg
ccgctgcgtcggcgccttgccgagaaattcgatcgaggcgcggccaataatgccctgctg
atcgaaagcatatcgggcatgcagacgatcaaggcggcggctgtcgagccgcaatggaat
catcgctgggaattgcagctggcggcttacagcacgtccaatcagcgcgcgatcaacctt
gccaacaacagcagccagctggtccagctcatctcgaagctgggggcggcgacgatcctg
tttttcggggcagggcaggtgatcgcgggcacgatgacggtgggggcgctcgtcgccttc
aacatgtttgcccaacgcgtgtcttctccggtcatccgcatggcgcaattgtggcaggac
tttcagcaggtccggctgtcggtggcgcaactggggctggtgctggatgcgccgatcgag
cggatcggatcctcgcggacgacgctgccgtcgatcagaggcaatatccgcttcgagggc
gtccgcttccgctatggcgatgaaggcccctggacgctggagaatatcgatttgggcctg
cctgcaggcgggactttgggcatcgccggatcctcgggctccggcaagtccacactcgcc
aagctgcttcagcgcctctacctcccggcagccgggcgcatcctgatcgatgatatcgac
atcgcacagatcgatccgacctggctgcgacgccagatcggcgtggtcctccaggaaaat
ctgctgttcaactgcaccctgcgtgaaaatatcgcgctttccagcccgatcgcgcctttg
tcggaggtgatgtccgccgcccggctggccggtgcccatgacttcatcatggggttgccg
ctcggctatgacagcatgattgaggaacgtggcgtcaatttgtcgggtggccagcgccag
cggattgcgattgcccgcgcgttgatgagcaagccccgcatcctgatcttcgatgaggcg
acatcggcgctcgatgccgagagcgaggagatcgtgcaggccaatctcaaggcgatggcc
gcgggacgcacggtgatcatcattgcccatcgcctgtccgcgatccgggattgcgacagc
atcgtcacgatggaacagggccatatcgtcgagcgcggatcgcatgaggaactgatcgcc
cgcaatggccgctatgccaaactctatcggacccagacgcggaccggcatggcgcgggcg
gtatga
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