KEGG   Sphingobium yanoikuyae: A6768_15620
Entry
A6768_15620       CDS       T05170                                 
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
sya  Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:sya00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sya03019]
    A6768_15620
Messenger RNA biogenesis [BR:sya03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     A6768_15620
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_33 AAA_22 Rad17 AAA_28 YfeC-like AAA_18 AAA_30 T2SSE ZSWIM1-3_C Zeta_toxin AAA_24 ABC_tran
Other DBs
NCBI-ProteinID: ATI81278
UniProt: A0A291N2B2
LinkDB
Position
3385297..3386235
AA seq 312 aa
MNDSAPKTILLVSGLSGAGKTTALKTLEDMGWEVVDNLPLVLLDRLLDTPLPAGHGGEDD
RPLALGIDARTRGFDANAIVQRIKALRERHGHDIETLFLDCSGAELERRYAETRRRHPLA
QDRPAADGIARERELTEPLRRWSAQLIDTTSLSTNALQQEMRARFAREQLSDPVLTILSF
GYSRGVPRNVDLMFDMRFLRNPFWDEDLRPKTGLDADVAAYIQADPAYQEALGKIQDLLT
TLLPRYAEAGKTYITVAFGCTGGRHRSVHVAEHVARYLQDAGFSPTVSHRNMESAPQDSL
EKRRPGGPKAIS
NT seq 939 nt   +upstreamnt  +downstreamnt
atgaacgatagcgcgcccaagaccatcctgctcgtctccggcctgtcgggcgccggcaag
accacggcgctcaagacgctggaggatatgggctgggaagtggtggacaatctgccgctg
gtgctgctcgaccgcctgctcgacacgcccctgcccgccggtcatggcggcgaggatgac
cggccgctggcgctcggcatcgacgcacgcacccgcggcttcgacgccaatgccatcgtc
cagcggatcaaggcgctgcgcgaacggcatggccatgatatcgagacattgttcctcgac
tgctcgggcgccgagctggagcgccgctatgccgaaacccgccgccgccacccgctggcg
caggatcgcccggccgccgacggcatcgcccgcgaacgcgaactgaccgaaccgctgcgc
cgctggtcggcccagctgatcgacaccaccagcctgtcgaccaatgcgctacagcaggaa
atgcgcgcccgcttcgcccgcgaacagctctccgacccggtgctgaccatcctctccttc
ggctattcgcgcggcgtgccgcgcaatgtcgacctgatgttcgacatgcgcttcctgcgt
aaccccttctgggacgaggatttgcgccccaagaccggcctcgacgccgatgtcgccgcc
tatatccaggccgacccggcctatcaggaggcgctgggcaagatccaggatctgctaacg
actctgctgccgcgctacgccgaagccggcaaaacctatattaccgtggctttcggctgc
accggcgggcgccatcgctcggtccatgtcgccgaacatgtcgctagatacttgcaagat
gcgggcttttcgcccaccgtctcgcaccgcaatatggaatcagcgccccaggacagtctg
gagaagcgcagaccgggaggcccgaaagcaatatcatga

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