KEGG   Sphingobium yanoikuyae: A6768_17980
Entry
A6768_17980       CDS       T05170                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K24073  RNA polymerase sigma factor CnrH
Organism
sya  Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:sya00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sya03021]
    A6768_17980
Transcription machinery [BR:sya03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A6768_17980
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 PhyR_sigma-like HTH_23 HTH_Tnp_ISL3 Xre-like-HTH GerE DUF134 HTH_17 HTH_10 HTH_AsnC-type HTH_3 HTH_28 HTH_24 KORA
Other DBs
NCBI-ProteinID: ATI81698
UniProt: A0A291N3J9
LinkDB
Position
complement(3925577..3926152)
AA seq 191 aa
MIADDPDDATLAAQAQAGRQAAYGALMRRHRDAVYRLARGHVGDADAAMDIVQESFVAAF
ASLARYDGRRPFRGWIARITINKCHDWARRRAVRRFFSFARPIEDAAHVADAAPDPEQAA
QSRAGVARIEAAVAALPVALREVVLLRGIEGMSQAEVAQILGVSEKAVETRLYRARRQLQ
EMLRESDAARV
NT seq 576 nt   +upstreamnt  +downstreamnt
gtgatagccgacgatcccgatgatgccacgctggcggcgcaggcgcaggccgggcggcag
gccgcctatggcgcgctgatgcggcggcaccgcgatgccgtctatcggctggcccgcggc
catgtcggcgatgcggacgcggcaatggacatcgtgcaggaaagcttcgtcgccgccttt
gcctcgctcgctcgctatgatgggcgtcggccctttcgcggctggattgcgcggatcacg
atcaacaaatgccatgactgggcgcgccgccgtgcggtgcgtcgcttcttcagcttcgcc
cggccgatcgaggatgccgcccatgtcgcggacgccgcccccgatcccgagcaggcggcc
cagtcccgcgccggcgtcgcccggatcgaggcggcggtggcggcgctgccggtggcgctg
cgcgaggtggttttgctgcgcgggatcgagggcatgagccaggccgaggtcgcgcagata
ttgggggtgagcgaaaaggcggtggaaacccgcctttaccgtgcccgccgacaattgcag
gagatgttgagggaaagcgacgcggcgcgcgtatag

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