Sphingobium yanoikuyae: A6768_17980
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Entry
A6768_17980 CDS
T05170
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sya03021
]
A6768_17980
Transcription machinery [BR:
sya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A6768_17980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_Tnp_ISL3
Xre-like-HTH
GerE
DUF134
HTH_17
HTH_10
HTH_AsnC-type
HTH_3
HTH_28
HTH_24
KORA
Motif
Other DBs
NCBI-ProteinID:
ATI81698
UniProt:
A0A291N3J9
LinkDB
All DBs
Position
complement(3925577..3926152)
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AA seq
191 aa
AA seq
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MIADDPDDATLAAQAQAGRQAAYGALMRRHRDAVYRLARGHVGDADAAMDIVQESFVAAF
ASLARYDGRRPFRGWIARITINKCHDWARRRAVRRFFSFARPIEDAAHVADAAPDPEQAA
QSRAGVARIEAAVAALPVALREVVLLRGIEGMSQAEVAQILGVSEKAVETRLYRARRQLQ
EMLRESDAARV
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgatagccgacgatcccgatgatgccacgctggcggcgcaggcgcaggccgggcggcag
gccgcctatggcgcgctgatgcggcggcaccgcgatgccgtctatcggctggcccgcggc
catgtcggcgatgcggacgcggcaatggacatcgtgcaggaaagcttcgtcgccgccttt
gcctcgctcgctcgctatgatgggcgtcggccctttcgcggctggattgcgcggatcacg
atcaacaaatgccatgactgggcgcgccgccgtgcggtgcgtcgcttcttcagcttcgcc
cggccgatcgaggatgccgcccatgtcgcggacgccgcccccgatcccgagcaggcggcc
cagtcccgcgccggcgtcgcccggatcgaggcggcggtggcggcgctgccggtggcgctg
cgcgaggtggttttgctgcgcgggatcgagggcatgagccaggccgaggtcgcgcagata
ttgggggtgagcgaaaaggcggtggaaacccgcctttaccgtgcccgccgacaattgcag
gagatgttgagggaaagcgacgcggcgcgcgtatag
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