Sphingobium yanoikuyae: A6768_19610
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Entry
A6768_19610 CDS
T05170
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00740
Riboflavin metabolism
sya00790
Folate biosynthesis
sya01100
Metabolic pathways
sya01110
Biosynthesis of secondary metabolites
sya01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
A6768_19610 (ribB)
00790 Folate biosynthesis
A6768_19610 (ribB)
Enzymes [BR:
sya01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
A6768_19610 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
A6768_19610 (ribB)
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
HTH_3
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ATI81984
UniProt:
A0A291N3L3
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Position
4235966..4237246
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AA seq
426 aa
AA seq
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MSSSLIDSVRALVTDGGMSRSGLARAAGLHANSLRKLGEGDWNPTAETLGKLEAYLLKRE
GGTALASPEEIINEARNGRMFILVDDEDRENEGDLVIPAQMATPDAINFMATHGRGLICL
ALTKDRVDQLGLDLMSRNNGTRHETAFTVSIEAREGVDTGISAADRARTVSVAIDASKTR
ADIVTPGHVFPLIARDGGVLVRTGHTEAAVDVARLAGLNPSGVICEVMKDDGTMARLDDL
IIFAQKHKMKIGTIRDLIAYRRRHDHVVERRAETSFESKWGGEWKAITFFNRATQSEQLV
LQKGRISPDQPTLVRMHQLAPLSDIFGAEGPRGDMLARSMEIINKEGAGVVVLLRDGEPD
MLTRMIQAHAGKQPGGMDELRDYGVGAQILAELGVHDMILLSNTQHSLIALDGYDLAVVG
QRPIEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgcttatcgattccgtccgcgccctcgttaccgatggcggcatgtcccga
tcgggtctggcgcgcgccgccggcctgcacgccaacagcctgcgcaagctgggcgaaggc
gactggaacccgacggccgagacgctgggcaagctggaagcctatctgctgaagcgagag
ggcggcaccgcacttgccagccccgaggaaatcatcaacgaggcccgcaacggccgcatg
ttcatcctggtcgatgacgaggatcgcgaaaatgaaggcgacctggtcattcccgcccag
atggcgacccccgacgcgatcaacttcatggccacccatggccgcggcctcatctgcctg
gcactgaccaaggatcgcgtcgaccagctggggctcgacctgatgagccgcaacaatggc
acccgccacgaaacggcgttcaccgtgtcgatcgaggcgcgtgaaggcgtcgacaccggc
atcagcgccgccgaccgcgcccgcaccgtatccgtcgccatcgacgcatccaagacgcgc
gccgacatcgtgacgcctggccatgtcttcccgctgatcgcccgtgacggcggcgtgctc
gtgcggaccggccataccgaggcggcggtggacgtcgcccgcctggccggcctcaatccg
tccggcgtcatttgcgaagtgatgaaggacgatggcacgatggcgcgcctcgacgacctg
atcatctttgcccagaagcacaagatgaagatcggcacgattcgcgacctgattgcctat
cgccgccgccacgaccatgtggtcgagcgtcgcgccgaaaccagcttcgaaagcaaatgg
ggcggcgagtggaaggcaatcaccttcttcaaccgcgccacccagtcggagcagctggtt
ttgcagaagggccgcatcagccccgaccagccgaccctggtgcgcatgcatcagctggct
ccgctgagcgacattttcggtgccgaaggcccacgtggcgacatgctggcccgatcgatg
gaaatcatcaataaggaaggcgccggtgtggtcgtgctgctgcgtgacggcgaacccgac
atgctgacccgcatgatccaggcccatgccggcaagcagcccggcggcatggacgaactg
cgcgactatggcgtgggcgcgcagatcctggcggaactgggcgtgcatgacatgatcctg
ctcagcaacacccagcacagcctgatcgcccttgacggctatgacctggccgtggttggg
cagcgtccgatcgagctctga
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