Sphingobium yanoikuyae: A6768_20285
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Entry
A6768_20285 CDS
T05170
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sya02000
]
A6768_20285
Transporters [BR:
sya02000
]
Other transporters
Pores ion channels [TC:
1
]
A6768_20285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF6748
Motif
Other DBs
NCBI-ProteinID:
ATI82107
UniProt:
A0A291N3Z8
LinkDB
All DBs
Position
complement(4384172..4387165)
Genome browser
AA seq
997 aa
AA seq
DB search
MKIHGSCHQRGRSLRLTWLGGSAVVAMLAAPAAAQEDGTSTADIIVTGSRIASPALTSPS
PLQVLTSETLENNGIVNIQDALQQNPAIGLPGLSRTTTANTTNPGLSTVNLRNLGPDRTL
VLIDGRRSVAGVPGTAQVDLSMIPTPFVERVDVLTGGASAVYGSDAVAGVVNFIYKKKFE
GVLLNAQAGISERGDDRQMVVNGTFGHNFADGRGNFMIYGGYVKEGAVDARSRSFSARDY
TSLGTIQRVAGNSDANLTAAQNIFTPFYNPSNVGPGGIFVIGSQTNRVIQPDGTFRAYNA
ATDGWNRAEWGLLASPSERITFAGRVNFDVNDSVNVFTEVTYSNVVTKGRMEASPMRTDS
ALGAFTGTNGFYPIQSRVLVPGGNGATVLVNNPFVPQAVLDAATDRTGDGLKDLSFLLRT
TAFAPGTRTIPTERDNFRAVLGTTVDLGSSWKFDAYYQYGFTKQNQSMSGLANLYNLAEG
LQVITDVYDFDRDGSTTDAVCANADARARGCVPINVYGAGKLTQEMVDYLEVSMQRNSKQ
SMHVAAANLTGTLFNLPGGSVQIAVGAEYRKEESRDIFDPLTNAARNGYVQLTDTAGSFD
VKEAYGELVVPILSDTPFFQSLTLRGAARMSDYSTVGTFYAWNAGVEWAPVEDIRFRAVY
AHAVRAPNIGELFAAQAAGIVTITDPCQGITLSTQGAIADNCRAVPGILANIQQNGSFTL
TQADLSGVGGITAANPDIREETGKTLTLGVVINPRSIPALRNLTFTADYFDIRLEDAISR
VPAATVLNKCYREGLADFCQFVTRRTEASGAYSIGSVEQVVRGLINSGGSFSRGLDFTLN
YSHQLFDGTASLSGAWTHLLKNGFRALTGDPYDNTMGELGTPRDSVNVGINWANDDFGIT
INNEYMGPQALDYENFQTLYRLADGSVPDSKYFRIKSKIYTDMQIRFTSIANFEFFMGAK
NMFDVKRPPVWGGLPGNVNGTYDVLGRRFYTGVRVKL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcacggttcctgccatcagcgcggccgcagcttgcgcctgacgtggcttggc
ggttcggctgtcgtcgcgatgctggccgcaccggcggcagcgcaggaggatggcacctcc
accgccgacatcatcgtcaccggcagccgcatcgcctcgccggcattgacgtcgcccagt
ccgcttcaggtgctgacatcggaaacgctggaaaataacggcatcgtcaacatccaggat
gccctgcagcaaaatcctgcgatcggtctgcccggtctcagccgcactaccaccgcgaac
accaccaatcctggcctctcgacggtcaatctgcgcaatctgggaccggatcgcaccctc
gtcctgatcgatggccgccggtcggtggccggggtgccgggcacggcgcaggtcgacctg
tcgatgatcccgacgcctttcgtcgagcgggtcgatgtgctgacgggcggcgcctccgcc
gtctatggctcggacgcggtcgcgggggtcgtcaacttcatctacaagaagaagttcgag
ggcgtgttgctcaatgcccaggccggcatttcggaacggggcgacgaccggcagatggtc
gtcaacggcaccttcggccataatttcgccgatggccgtggcaatttcatgatctatggc
ggttatgtgaaggaaggggcggtcgatgcccgttcgcgcagcttctcggcgcgcgactat
accagcctgggcacgattcagcgggtggcgggcaacagcgacgccaatctgaccgctgcg
cagaatatcttcacgccgttctacaacccgtccaatgtcggccccggcggcatcttcgtg
atcgggtcgcagaccaatcgcgtgatccagcccgacggtacgtttcgcgcctataatgcg
gcgaccgatggctggaaccgcgccgaatgggggctgctggcctcgccatcggaacgcata
acctttgccggacgtgtcaatttcgatgtcaatgacagcgtcaatgtcttcaccgaagtc
acctattccaacgtcgtgacgaaggggcggatggaggcatcgccgatgcggaccgacagt
gcgctgggcgccttcaccggcaccaacggcttctatccgatccagtcgcgcgtgctggtg
cccggcggcaacggcgcgaccgtgctggtcaacaatcccttcgtgccgcaggccgtgctc
gacgcggcgaccgaccggaccggcgatggcctcaaggatctcagcttcctgctgcgcacc
accgcctttgcccccggcacccgcaccatcccgaccgagcgcgacaatttccgcgcggtg
ctgggcaccaccgtggacttgggcagcagctggaagttcgacgcctattatcaatatggc
ttcacgaaacagaatcagtcgatgtccggcctcgccaatctctacaatctggccgagggc
ttgcaggtcatcaccgacgtctacgacttcgatcgcgacggcagcaccaccgatgcggtc
tgtgccaatgccgacgcacgggcgcgcggctgcgtgccgatcaacgtctatggcgctggc
aagctgacccaggaaatggtcgactatctcgaagtgtcgatgcagcggaacagcaagcag
agcatgcatgtcgccgccgccaacctcaccggaacattgttcaacctgcccggcgggtcg
gtccagatcgcggtcggcgcggaatatcgcaaggaggaaagccgcgacatcttcgatccg
ctgaccaatgcggcgcgcaatggctatgtccagctgaccgacaccgccggcagcttcgac
gtcaaggaagcctatggcgaactggtcgtgccgatcctgtccgacacgcccttcttccag
agcctgacgctgcgtggcgcagcccgcatgtcggattattcgacggtcggcacattctac
gcatggaatgccggcgtcgaatgggcgccggtcgaggatatccgcttccgtgcggtctat
gcccatgcggtgcgcgcacccaatatcggcgaattgttcgcggcgcaggcggcgggcatc
gtgaccatcaccgatccctgccaggggatcaccctgtcgacccagggcgcgatcgccgac
aattgccgggcggtgccgggcatcctggccaatatccagcaaaatggttccttcaccctg
acccaggcggacctgtcgggcgtgggcggcatcaccgccgccaatcccgacatccgtgag
gaaacgggcaagacgctcaccctgggcgtggtcatcaatccccggtcgatcccggcgctg
cgcaacctgaccttcaccgccgattatttcgatatcaggctggaggatgcgatcagccgc
gttccggcggcgaccgtactcaacaaatgctatcgcgaggggctggccgatttctgccag
ttcgtcacccggcgcacggaggcgtccggcgcctacagcatcggttcggtggaacaggtg
gtacgcggcctcatcaacagcggcggttccttctcgcgcgggctcgatttcacgctcaac
tacagccatcaactgttcgacggcaccgccagcctgtcgggcgcctggacccatctgctc
aaaaatggcttccgggcgctgaccggcgatccctatgacaatacgatgggtgaactcggg
acaccgcgcgattccgtcaatgtcggcatcaactgggccaatgatgatttcggcatcacc
atcaacaatgaatatatggggccgcaggcgctggattatgagaatttccagaccctctat
cgcctggcggacgggtcggtgccggactccaaatatttccgcatcaagtcgaaaatctac
accgacatgcagatccgcttcacatcgatcgcgaacttcgaattcttcatgggggccaag
aacatgttcgacgtgaagcgtccgccggtctggggtggcctgccgggcaatgtcaacggc
acctatgacgtgctgggccggcgcttctacaccggcgtgcgcgtcaagctctga
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