Sphingobium yanoikuyae: A6768_21055
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Entry
A6768_21055 CDS
T05170
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sya03016
]
A6768_21055
Transfer RNA biogenesis [BR:
sya03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
A6768_21055
Prokaryotic type
Methyltransferases
A6768_21055
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
4HBT_3
ABC_tran
AAA_28
AAA_18
AAA_24
Arf
Motif
Other DBs
NCBI-ProteinID:
ATI82234
UniProt:
A0A291N4A5
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Position
complement(4557638..4558924)
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AA seq
428 aa
AA seq
DB search
MSETIFALSSGAPPAGIGVVRVSGPMAGAALQALAGRLPTPRMASLALLSDPRDGAPLDR
ALLLWLPGPRTVTGEDMAELHCHGGRAVIAAVEAALGAMPELRRATAGEFTRRAFAHGRM
DLNEVEGLADLLAAETQQQRRAALAMMEGHFSQRIDGWRMRLLDLSAMAEAALDFSDEDD
VPDADIEARIGQGVMALADDVGALLSAPSAERLRDGIRVVLAGPPNAGKSTLLNRLVGRE
AAIVSDIAGTTRDRIEVPAAIGGTAFLFTDTAGLRDETGDAIEAIGIDRARAALEAADII
LWLGEPAEAPREDALLIAAQSDVALYGSDRPGLRLSARTGEGMDALVAELLGRASTLLPG
EGDYALHARQRDGVRQLHGHLLAAGAARDLLVLAEELRLGRRTIDALTGQAGTEDMLDRL
FSGFCIGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagacgatcttcgccctgtcgagcggtgcgccgccggcggggattggcgtggtg
cgcgtcagcggcccgatggcgggcgcggcgttgcaggcgctggccgggcgactgcccacc
ccccgcatggcgagcctggcgctgctgagcgatccgcgcgatggcgcgccgctcgaccgg
gcgctgctcttgtggttgccggggccgcgcacggtgacgggcgaggatatggccgagttg
cattgccatggtggccgcgcggtgattgcggcggtcgaggcggcgctgggcgcgatgcca
gagttgcgccgcgcaactgcgggcgagttcacccgccgcgcctttgcccatggtcgcatg
gacctgaatgaggtcgaagggttggccgatctgctggcggccgagacgcagcagcagcgg
cgggcggcactggcgatgatggagggccatttctcgcagcggatcgacggctggcggatg
cggctgctcgacctgtcggcgatggcagaggcggcgctcgacttctccgacgaggatgat
gtgcccgacgccgatatcgaggcgcggatcgggcagggggtgatggcactcgcggacgat
gtcggtgcgttgctgtcggcgccttcggccgagcggctgcgcgacggcattcgcgtcgtg
ctggccgggccgcccaatgccggcaagtcgaccttgctcaaccggttggtggggcgagag
gcagcgatcgtgtccgacattgccggcaccacccgcgaccggatcgaagtgcccgccgcg
attggcggtaccgccttcctgttcaccgacacggccggactgcgcgacgagaccggcgat
gcgatcgaggcgatcggcatcgaccgcgcacgcgccgcgctggaggcggcggacatcatc
ctgtggctgggcgaaccggccgaggcaccacgcgaggatgcgctgttgattgcggcgcag
agcgatgtcgcgctgtacggttccgaccggcctggccttcgcttatcggcgcgaacgggc
gaagggatggacgcgctggtggctgagttgcttggccgagcgtcgacgctattgccgggc
gagggcgactatgccctgcatgcgcggcaacgggacggcgtgcgccagctgcacggccat
ctgctcgccgcaggcgcggcccgcgatctgctggtgttggcggaggagttgcgtctggga
cggcggacgattgatgcgctgactggacaggcggggaccgaggatatgctcgaccgtctc
ttctcgggattctgtatcgggaagtga
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