KEGG   Sphingobium yanoikuyae: A6768_21325
Entry
A6768_21325       CDS       T05170                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sya  Sphingobium yanoikuyae
Pathway
sya03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A6768_21325 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sya03400]
    A6768_21325 (xth)
Enzymes [BR:sya01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     A6768_21325 (xth)
DNA repair and recombination proteins [BR:sya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     A6768_21325 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ATI82284
UniProt: A0A291N4F2
LinkDB
Position
4606220..4607017
AA seq 265 aa
MADTLSIASWNINSVRARIDIVERFLTEEAPDILCLQETKVVNEIFPTDMFRRLGYVHQV
LNGQRMHHGVAIMSKVPIHEDDRFDWQANGEARHVGIRLDNGVRIENVYVPAGGDVADRT
VNPKFGQKLDFIERMIEWSGALDNKPTILTGDFNIAPLECDVWSHKQLLDVVSHTPVECE
LLGRLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAASDRGRRLDHMWMTKDVADKAVA
HRVVEPARSWEKPSDHIPIITEFAF
NT seq 798 nt   +upstreamnt  +downstreamnt
atggccgataccctttcgattgcatcctggaacatcaacagcgtccgcgcccggatcgac
atcgtcgaacgcttcctgaccgaggaagcgcccgacattctctgcctgcaggaaaccaag
gtggtgaacgagattttccccaccgacatgttcaggcgcctgggatatgtccatcaggtg
ctgaacggccagcgcatgcatcatggcgttgcgatcatgagcaaggtgccgatccacgag
gatgaccggttcgactggcaggccaatggcgaagcgcgccatgtcggcatccgcctcgac
aatggcgtgcggatcgagaatgtctatgtccctgccggcggcgatgtcgccgaccgcacg
gtcaatcccaaattcggccagaagctcgactttatcgagcggatgatcgagtggtccggc
gcgctcgacaacaagccgaccatccttaccggcgacttcaacatcgcgcctttggaatgt
gacgtctggagccacaagcagctgctcgacgtggtcagccatacgccggtcgaatgcgaa
ctgctgggccggttgcaggcgtcgaacgactgggtcgatatcggccgtcatttccatccc
gcgccggcgcgtctctacacctggtggagctatcgcgcgaaggattgggcggcgtcggat
cgcggccgtcgccttgaccatatgtggatgaccaaggatgtcgccgacaaggcggtcgcc
caccgtgtcgtcgaacccgcgcgcagctgggaaaagccgtccgaccatatcccgatcatc
accgagttcgccttctga

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