Sphingobium yanoikuyae: A6768_21345
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Entry
A6768_21345 CDS
T05170
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sya
Sphingobium yanoikuyae
Pathway
sya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A6768_21345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_21345
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
A6768_21345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ATI82288
UniProt:
A0A291N5A4
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Position
complement(4611371..4614013)
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AA seq
880 aa
AA seq
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MANSTSTTTQPTPMMAQYFTLKAEAQDCLLFYRMGDFFELFFDDAKMAAATLDIALTSRG
EHAGQPIPMCGVPVHSAESYLARLIKGGHRVAIAEQTETPAEAKARGGKALVARAIVRYV
TAGTLTEETLLDSRRDNMLVALAQTGGEGELGLAAADISTGRFETMTVRAGDLPAELARL
RPSEVVIAEGSTLEVANSHPFDKAAFSSARAEDALKRLFAVATLDGFGQFSRAELAAMGG
LIAYLDHAGKGTLPFLAPPLRKTSGAHVAIDAATRESLEIVATTGGTRAGSLLGAVDRTV
TGAGARLLAQDLSAPLMDAPLIDARLGLVQLFHDDATLRSQLRAALRALPDIGRALGRVA
VGRGSPRDLGQLRDGLGEARLLRERLGRLADQPLLLTQLLPALDGHGALVDALARALVPS
PPTETNNGGYIADGFDPALDELRRLAGDGRRAIAALEAQYREQTGISALKIRHNGVLGYH
VEVPARAADQLMQPESGFTHRQTLAGVVRFNSIDLHEQAGRVAQAGAHALVAEAAHLETL
IEAVLDRKADIARAADALARLDVAAALAERAAEGGWQRPHFVVEDGVGPCLDIVGGRHPV
VEDALRAQGQPFVANDCRLVATDRLWLVTGPNMGGKSTFLRQNALIVILAQAGAFVPAES
ATLTLVDRLFSRVGASDNLARGRSTFMVEMVETAAILAQATEHSFVILDEVGRGTSTYDG
LALAWAVVEAVHEVNRCRCLFATHYHELTRLSETLDALSLHHVRAREWKGDLVLLHELAE
GPADRSYGLAVARLAGLPPLVLKRAKDVLGRLEAGKAKTGGIAAGLDDLPLFASVATQVE
EVVDPLRDALDGIDADALSPREALDHIYRLKQLAAASHHE
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcgacctccaccaccacccagcctacccccatgatggcacaatatttcacc
ctcaaggcagaggcgcaggattgcctgctcttctaccgcatgggcgatttcttcgaactc
ttcttcgatgacgccaagatggcggccgcgacgctcgacattgcgctcaccagccgtggc
gaacatgccgggcagccgatcccgatgtgcggcgtgccggtgcatagcgccgaatcctat
ctcgcccggctgatcaagggcggccatcgcgtcgccatcgccgaacagaccgagacgccg
gccgaggccaaggcacggggcggcaaggcgctcgtggcacgcgccatcgtccgctatgtc
accgccggcacgctgaccgaggaaaccctgctcgacagccggcgcgacaatatgctggtg
gcgctcgcccagaccggtggggaaggcgagctgggcctggccgccgccgacatctcgacc
ggccggttcgagacgatgacggtgcgggctggcgacctgcccgccgaactcgcccggttg
cggccgagcgaagtggtgattgccgaaggttcgacgctggaggtcgccaacagccatccg
ttcgacaaggctgccttttccagtgcccgcgcggaagacgcgctcaagcgcctgttcgcg
gtcgcgacgctggatggctttggccagttcagccgcgccgaactggccgcgatgggcggg
ctgattgcctatctcgaccatgcggggaagggcacactgcccttcctggcgccgccgctg
cgcaagaccagcggcgcccatgtcgccatcgacgcggcgacgcgcgagagcctggaaatc
gtcgcgaccaccggcggcacgcgggcgggcagcctgttgggcgcggtcgaccggaccgtc
accggggccggcgcccggctgctggcacaggatctgtcggcgccgctgatggatgcgccg
ctgatcgacgcgcggctgggcctggtgcagttgttccatgatgacgcaacgctgcgcagt
cagttgcgtgcggcgctgcgggcgttgcccgacatcggccgcgcgctggggcgtgtcgcc
gtggggcggggcagcccgcgtgacctcggccaattgcgcgacggcctgggcgaagcgcga
ttgctgcgcgagcggctggggcggctggccgatcagccactgctgctgacccagttgctg
ccggcgctcgacgggcatggcgcgctggtcgatgcgctggcgcgcgcattggtaccgagc
ccgccgaccgagaccaataatggcggctatatcgccgacggcttcgacccggcgctggac
gaactgcgccgcctggcgggcgatggtcgccgcgcgatcgccgcgctggaggcgcaatat
cgcgagcagacggggatcagcgcactcaagatccgccataatggcgtgctgggctatcat
gtcgaggtgccggcccgcgccgccgaccagctgatgcagcccgaaagcggcttcacccat
cgccagacgctggccggggtcgtgcgcttcaactcgatcgacctgcatgagcaggccgga
cgggtggcgcaggccggcgcccatgcgctggtggcggaggccgcccatctcgaaacgctg
atcgaggcggtgctggaccgcaaggccgacatcgcccgcgccgccgatgcgctggcgcgg
ctggacgttgccgccgcgctggccgaacgggcagctgaaggcggctggcaaaggccccat
ttcgtggttgaggacggggtcggcccctgcctagacattgtcggcgggcgccatccggtg
gtcgaggatgcgctgcgcgcgcagggacagcctttcgttgccaatgattgccggctggtg
gcgaccgacaggctatggctggtcaccggcccgaacatgggcggtaagtcgaccttcctg
cggcagaatgcgctgatcgtcatcctggcccaggccggggccttcgtgccggcggaatcg
gcgacgctgaccctggtcgaccgcctgttcagccgggtcggcgcctccgacaatctggcg
cgcggccggtcgaccttcatggtcgaaatggtcgagaccgctgcgatcctggcgcaggcg
accgagcatagcttcgtcatcctggacgaggtcgggcgcggcacatccacctatgacggc
ctcgcgcttgcctgggcagtggtcgaagcggtgcatgaggtcaatcgctgccgctgcctg
ttcgcgacccattatcatgagctcacacgcctgtccgaaacgctcgatgcgctgtcgctg
catcatgtgcgggcacgcgaatggaagggcgacctggtgctgctgcacgaactggccgaa
gggccggctgatcgcagctatggcctggcggtggcgcggctggccggcttgccgcccctg
gtgctcaagcgcgccaaggatgtgctgggccggctggaggcaggcaaggcgaagaccggc
ggcattgccgcagggctggacgacctgccgctgttcgccagcgtcgcgacccaggtcgaa
gaggtcgtcgatccgctgcgcgacgcactggatggcatcgacgccgacgccctgtccccg
cgtgaggcactcgatcacatatatcgtttgaaacaactggccgccgccagtcaccacgag
tag
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