Sphingobium yanoikuyae: A6768_22690
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Entry
A6768_22690 CDS
T05170
Name
(GenBank) fatty-acid oxidation protein subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sya
Sphingobium yanoikuyae
Pathway
sya00071
Fatty acid degradation
sya00280
Valine, leucine and isoleucine degradation
sya00310
Lysine degradation
sya00362
Benzoate degradation
sya00380
Tryptophan metabolism
sya00410
beta-Alanine metabolism
sya00640
Propanoate metabolism
sya00650
Butanoate metabolism
sya00907
Pinene, camphor and geraniol degradation
sya00930
Caprolactam degradation
sya01100
Metabolic pathways
sya01110
Biosynthesis of secondary metabolites
sya01120
Microbial metabolism in diverse environments
sya01200
Carbon metabolism
sya01212
Fatty acid metabolism
Module
sya_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A6768_22690
00650 Butanoate metabolism
A6768_22690
09103 Lipid metabolism
00071 Fatty acid degradation
A6768_22690
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A6768_22690
00310 Lysine degradation
A6768_22690
00380 Tryptophan metabolism
A6768_22690
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A6768_22690
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A6768_22690
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A6768_22690
00930 Caprolactam degradation
A6768_22690
Enzymes [BR:
sya01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A6768_22690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A6768_22690
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A6768_22690
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GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ATI83472
UniProt:
A0A291N7Z5
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All DBs
Position
4907090..4909180
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AA seq
696 aa
AA seq
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MNDPVWSFLADRDLETGPASHRAEALHHWRFTRDAHNIGWAILDQQGTDTNLLSQAVLEE
LGHILDMIADRAPKALVIRSGKKQGFLAGADISEFRDMRDEAMVRDRIAAAHAIVDRLEA
LTFPTIAVIHGYAMGGGLEVALACHQRIAIEGTKLGFPEVQLGLHPGLGGTARFTHLCDP
IAAMELMLTGKSIDAGHAKDMGLVDAVVPERHVHAAIMAAVAGDMDQGRQALLDRLKDAA
PVRHLAARQMRSQAEAKAPLAHYPAPHALIDLWETHGGDQEAMKRAEITSFAHLMMSDSA
QNLIRAFFLRQKLKALAGPGNKTIAHVHVIGAGAMGGDIAAWCAWRGLRTSISDVKPGPI
GAALNRAAKLYEKLAHGDRLKVRDALDRLIPDPDGAGIAKADILIEAAPEKVDLKRILYA
SAEPRMKDGAILATNTSSIPLEQLREGLRHPERLIGIHFFNPVSRLDLVEVISHDGVDPE
VEAGARAFVGIIGKLPAPARSAPGFIVNRILTPYLVEAMTMMEEGIAPETIDRAAMDFGM
PMGPLELADQVGLDIGLAVAAMLKRELDWPMPATPQWLADKVSAGQLGRKAGKGIYAWKD
GHAVKNSAPQPPPEMADRLIMPMLNMAAATLREQVTDDPDIIDAAMIFGTGFAPFRGGPL
HYAHARGIGEVKAVLEGLREAHGERFRPDPGWDLLQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcctgtctggtcctttcttgccgatcgcgatctcgagaccggtcccgcgtcc
catcgcgcggaggccctgcatcactggcgcttcacgcgcgatgcccataacattggctgg
gctatcctcgatcagcaaggaacggacaccaatcttctgtcccaggccgtgctcgaagag
cttggccatatactcgacatgatcgccgaccgtgcgccgaaggcgctggtcattcgctca
ggcaagaaacagggctttcttgccggcgcggatatcagcgagtttcgtgacatgcgcgac
gaggcgatggtgcgcgaccggatcgccgccgcgcatgcgatcgtcgaccgtctcgaagcg
ctgacctttcccaccattgcggtcatccacggctatgcgatgggtggcggccttgaggtc
gcgctggcgtgccatcagcgcattgccatcgaagggacaaagctcggcttccccgaagtg
cagcttggcctgcatccggggctcggcggcacggcacgcttcacccatttatgcgatccg
atcgcggcgatggaactgatgctgaccggcaagtcgatcgatgctggccacgcgaaagac
atggggctggtcgatgcggtagttcctgaacgccatgtccacgccgccatcatggcagcg
gttgcaggagatatggaccagggccgtcaggcattgctggatcgcctgaaggacgccgcg
ccagtccgccatctggcagcgcggcagatgcgcagccaggcggaagccaaggcacccttg
gcccattatcccgcgccccatgcgctcatcgacctgtgggaaactcatggtggcgaccag
gaggcgatgaaacgggcggagatcacttccttcgcacatctcatgatgagcgatagcgcg
caaaatctcatccgtgcctttttcctgcgccagaagctcaaggcactggctgggccgggc
aataagacgatcgcccatgtccatgtcatcggtgcgggcgcgatgggcggcgacatcgcg
gcctggtgcgcctggcgcggcctgcgcaccagcatctccgacgtgaagcccgggccgatt
ggcgcggcccttaaccgagctgcgaagctgtatgaaaagctcgctcatggagatcggctc
aaggttcgcgatgcgctggatcggttgatccctgacccggatggtgcgggcatcgccaag
gccgacattctgatcgaggcagccccggaaaaggttgatctcaagcggatcctctatgcg
agcgccgagccacgtatgaaggacggcgcaatcctggcgaccaacacctcctccattccg
cttgagcaattgcgcgaggggttacgccatcccgagcgactgatcggcatccatttcttc
aatcccgtgtcgcggctcgacctggtggaggtcatcagccatgacggggtcgatccggaa
gtcgaggcaggcgcaagagcctttgtcggcatcatcggcaagctgccggccccggcccgc
agcgccccaggcttcatcgtcaaccggatccttaccccctatctggtcgaggcgatgacg
atgatggaagagggcatcgcgcccgagacgatcgacagggcggcaatggatttcggcatg
cccatgggccccctggaacttgcagatcaggtcggcctcgatatcggccttgcggttgcc
gccatgctcaagcgagaactggactggcccatgcctgccacgccgcaatggttggcagac
aaggtctcggcgggtcagttgggccggaaagccgggaaaggcatatatgcctggaaggac
ggccatgcggtcaagaacagcgccccgcagcccccgccggagatggcggaccggctcatc
atgccgatgctcaacatggccgccgcgaccctgcgcgagcaggtgaccgacgatccagat
atcatcgacgctgccatgatcttcggcaccggatttgcgcccttccgcggcggaccgctc
cattatgcccacgcacgcgggattggcgaggtcaaagccgtgctggaagggctgcgcgaa
gcccatggcgagcggttccggcccgatccgggctgggacttgctgcaatga
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