KEGG   Sphingobium yanoikuyae: A6768_23310
Entry
A6768_23310       CDS       T05170                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sya  Sphingobium yanoikuyae
Pathway
sya02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sya00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A6768_23310 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sya02044]
    A6768_23310 (trbB)
Enzymes [BR:sya01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     A6768_23310 (trbB)
Secretion system [BR:sya02044]
 Type IV secretion system
  Trb secretion system protein
   A6768_23310 (trbB)
SSDB
Motif
Pfam: T2SSE FtsK_SpoIIIE nSTAND3 Zeta_toxin TrwB_AAD_bind AAA_16 CbiA DEAD NACHT DUF87 ResIII AAA_30 AAA_22 AAA_28 IstB_IS21 Sigma54_activat ABC_tran cobW AAA_7 SLFN-g3_helicase AAA_19 RsgA_GTPase AAA_29 Mg_chelatase MobB AAA_18 TsaE AAA_2 AAA_25 Pox_A32 AAA_23 ABC_ATPase ATPase GTP_EFTU P-loop_TraG AAA_5 AAA AAA_33 CLP1_P Sigma54_activ_2 PduV-EutP MMR_HSR1 DUF815 RNA_helicase SRPRB AAA_11 NPHP3_N
Other DBs
NCBI-ProteinID: ATI83487
UniProt: A0A291N7Y7
LinkDB
Position
5036882..5037868
AA seq 328 aa
MSETATIAVRKPQRSARMLQTALGPHIGRWLQDPAVIEVMLNPDGHLWVDRLGEGMYDSA
IRLAQEDAERIIRLIAHHVGVDAHSGSPRVSAELPITGERFEGLLPPIVRAPTFAIRKPA
TAIFTIDDYVAAQVITHEQATVLRRAVADRANIIIAGGTGSGKTTLANALLAEIAKSPHR
VVLIEDMRELQCASPNLVAMRTRDGIASLQDLVRSALRLRPDRIPIGEVRGAEALDLLKA
WGTGHPGGIATLHAGSALGALRRLEQLIQEAVVTVPSALIAETVNLIAVLDRNAQGRRLT
ELAWVTGLDSATGNYRLISHASSSGEDS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtctgagaccgcgacaatagctgtcagaaagccccagcgcagcgcgcgcatgctgcag
acagccttggggcctcatatcgggcggtggctccaggatccggccgtcatcgaggtcatg
ctcaatccggacggtcacctctgggtagatcggctgggcgagggcatgtacgacagcgcc
atcaggctggcacaagaggatgcagaacgcatcattcgcctcatcgcccatcatgtcggc
gtggacgcacattcaggatcgccgcgcgtgtcggcagagttgccgataacgggagagcgg
ttcgaggggctgctcccaccgattgtcagggcgccgaccttcgccattcgcaagccagcg
accgcgatcttcacgatcgacgactatgtcgcagcgcaggtgatcacgcatgaacaggcg
acagtgctgcggcgtgctgttgccgaccgtgccaatatcatcatcgcgggcggcacggga
tcgggcaagacgacgctggccaatgcccttctcgccgaaatcgccaagtcgccgcatcgg
gtcgtcctcatcgaggatatgcgtgagctgcaatgtgcctcgcccaatctggtcgccatg
cggacgagggatggcatagcatcgctgcaggatctggtgcgctcggccttgcgtctgcgc
cctgaccgcatccccattggcgaagtacgcggggcagaggcgctcgatctgctcaaggcc
tggggaaccggccatcccggcggcatcgcgacgcttcatgccggttccgccctcggcgcg
ctccgccggctcgaacagctgatccaggaagcggtcgtgacggtgcccagcgcactcatc
gcagaaaccgtcaatctcatcgcggtccttgatcgcaatgcccagggccgacgcctcacc
gaactggcctgggtgacaggccttgattccgcgaccggcaattatcgcctgatttctcat
gcttccagctcaggagaagattcatga

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