KEGG   Streptomyces yangpuensis: NRK68_08260
Entry
NRK68_08260       CDS       T08585                                 
Name
(GenBank) DEDDh family exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
syan  Streptomyces yangpuensis
Pathway
syan03030  DNA replication
syan03430  Mismatch repair
syan03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NRK68_08260
   03430 Mismatch repair
    NRK68_08260
   03440 Homologous recombination
    NRK68_08260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syan03032]
    NRK68_08260
   03400 DNA repair and recombination proteins [BR:syan03400]
    NRK68_08260
Enzymes [BR:syan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NRK68_08260
DNA replication proteins [BR:syan03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NRK68_08260
DNA repair and recombination proteins [BR:syan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NRK68_08260
SSDB
Motif
Pfam: RNase_T BRCT Rv2179c-like RNase_H_2 PTCB-BRCT DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UUY47211
UniProt: A0ABY5PSV8
LinkDB
Position
1791851..1792831
AA seq 326 aa
MTMLDDRTTAETTWPTAYPQGYAVVDVETTGLARDDRIVSAAVYRLDAQGNVEDHWYSLV
NPQRDPGPVWIHGLTSDVLAGAPLFKDIAEEFAGRLADRVLVAHNAIFDWQMIAREYARA
ETTAPVRQRLCTIALSKELNLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSL
HAAAQGGVRLPLLECRPLTEWSDSAAAPRVGHQASYRGGGSWRPSRRRPACPHPNPGRFE
DGKPLKQGMRVAFSGDTSVERELLEDRAIEAGLHVATSVSRLTSLLVTNDPDSATSKTVK
AKSFGTPVVDEAAFTQLLRDVAPAGE
NT seq 981 nt   +upstreamnt  +downstreamnt
gtgaccatgctcgacgaccgtacgaccgcagagacgacgtggccgaccgcctacccccag
gggtacgcggtcgtcgacgtggagaccaccgggctcgcgcgcgacgaccggatagtctcc
gccgccgtctaccggctcgacgcacagggcaacgtggaggaccactggtacagcctggtc
aacccgcagcgggatccgggcccggtgtggatccacggcctgacgagtgacgtgctcgcc
ggtgcgcccctcttcaaggacatcgccgaggagttcgccggccggctcgcggaccgcgtg
ctggtcgcgcacaacgccatcttcgactggcagatgatcgcccgggagtacgcgcgggcg
gagaccaccgcgccggtccgccagcggctgtgcaccatcgccctgtcgaaggagctgaac
ctcccgctgcccaaccacaagctggagtcgctggccgcgcacttcggtgtggtccagcag
cgcgcccaccacgcgctcgacgacgcccgggtgctcgcggaggccttccgcccgtcgctg
cacgcggcggcgcagggcggcgtacggctgccgctgctggagtgccggccgctgacggag
tggtcggactcggccgccgccccgcgcgtcggccaccaggcgtcgtaccggggcggcggc
agctggcggccctcgcgcaggcggccggcgtgcccgcatcccaacccggggcgcttcgag
gacggcaagcccctcaagcagggcatgcgggtcgccttctccggcgacacctcggtggag
cgggagctgctggaggaccgggcgatcgaggcgggcctgcacgtcgcgacgagtgtgtcg
cggctcaccagcctcctggtgacgaacgaccccgactcggcgacctcgaagacggtcaag
gcgaagtccttcggcacccccgtcgtcgacgaggcggccttcacgcagttgctgcgggac
gtggccccggccggggaatga

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