Streptomyces yangpuensis: NRK68_08870
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Entry
NRK68_08870 CDS
T08585
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03030
DNA replication
syan03410
Base excision repair
syan03420
Nucleotide excision repair
syan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NRK68_08870 (polA)
03410 Base excision repair
NRK68_08870 (polA)
03420 Nucleotide excision repair
NRK68_08870 (polA)
03440 Homologous recombination
NRK68_08870 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syan03032
]
NRK68_08870 (polA)
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_08870 (polA)
Enzymes [BR:
syan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NRK68_08870 (polA)
DNA replication proteins [BR:
syan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NRK68_08870 (polA)
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NRK68_08870 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NRK68_08870 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UUY47321
LinkDB
All DBs
Position
complement(1924804..1927527)
Genome browser
AA seq
907 aa
AA seq
DB search
MADSASKKTDQTTAADRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSTEFPEYKANRSKTPDEFKGQVELIGELLDAMKVPRF
AIDGFEADDVIATLATQAEALGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVEEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTAAKWITQFGSFAELVERAEEVKG
KAGQNFRDHLEAVKLNRVLTEMVKDVELPRGAADLGRLPYDRAAVTGVLDVLEIRNPSLR
ERLLAVDPGAAGQEAAPAPAPGVELDGSVLGTGELAPWLESHAGGPLGVATVDSWALGQG
SVAEIALAAAGGAAAWFTPAELDESDERAFAAWAADAARPKVVHNAKALMRVFPEHGWSL
AGVTMDTALAAYLVKPGRRSFALDALSTEYLHRELAPAAADGQLAFGADETAEAEALMAQ
ARAVLDLGDAFSGKLAEVGAAELLHDMELPTSELLARMERAGIAADRDHLEAMEQQFAGA
VQQAVKEAHAAVGHEFNLGSPKQLQEVFFGELDLPKTKKTKTGYTTDADALAWLATQTDH
ELPVIMLRHREQAKLRVTVEGLVKTIAADGRVHTSFSQTVAATGRLSSTDPNLQNVPVRT
DEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFASGEDLHTTVASQVF
GVERDQVDAEMRRKIKAMSYGLAYGLSAFGLSQQLGIEPAEARGLMETFFERFGGVRDYL
QRVVDEARATGYTATVFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKVAMLR
VDKAITEAGLRSRMLLQVHDEIVLEIAPGEREQVEELVRREMGAAVELRAPLDVSVGVGS
DWESAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtggcagattcagcatcgaagaagacggaccagacgaccgcagcggaccgcccccgcctg
atgctcatggacgggcactccctggcgtaccgggcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgacggggcagccgaccaacgccatctacggcttcgcgtcgatgctggcg
aacacgctgcgcgacgaggcgcccacacacttcgcggtggcgttcgacgtgtcccgcaag
acgtggcgttcgacggagttccccgagtacaaggcgaaccgttccaagacgcccgacgag
ttcaaggggcaggtcgagctgatcggcgagctgctcgacgcgatgaaggtgccgcggttc
gcgatcgacggtttcgaggccgacgacgtgatcgcgacgctggcgacgcaggcggaggcc
ctcggtttcgaggtgctgatcgtcaccggcgaccgggactccttccagctcgtgtccgag
cacacgaccgtgctctacccgaccaagggcgtctcggagctgacgcgcttcacgccggag
aaggtcgaggagaagtacgggctcaccccgcagcagtacccggacttcgcggccctgcgc
ggcgacccgtccgacaacctgccgggcatcccgggcgtcggtgagaagaccgccgccaag
tggatcacgcagttcgggtcgttcgcggagctcgtggagcgtgccgaggaggtcaagggc
aaggccgggcagaacttccgggaccacctggaggccgtcaagctcaaccgggtcctgacc
gagatggtcaaggacgtggagctgcccaggggcgccgccgacctgggccgcctgccgtac
gaccgggccgcggtgaccggggtgctggacgtgctggagatccgcaacccgtcgctgcgg
gagcggctgctggccgtggacccgggcgcggccgggcaggaggccgccccggcgccggcg
ccgggcgtcgagctcgacgggtccgtgctgggcacgggcgagctggcgccgtggctggag
agccacgcgggcgggccgctgggtgtcgcgaccgtcgacagctgggctctcggccagggc
agcgtcgccgagatcgcgctggccgcggccgggggagccgccgcctggttcacgccggcc
gagctggacgagagtgacgagcgggccttcgcggcctgggcggcggacgcggcccgtccc
aaggtcgtgcacaacgccaaggccctgatgcgggtcttccccgagcacggctggagcctc
gccggcgtcaccatggacaccgcgctcgccgcctacctggtcaagccgggccggcggtcc
ttcgcgctggacgccctgtccacggagtacctgcaccgtgagctggcccccgccgccgcg
gacgggcagctcgccttcggcgccgacgagaccgccgaggccgaggcgctgatggcgcag
gcccgcgccgtcctggacctgggcgacgccttctccggcaagctcgccgaggtcggcgcg
gccgagctgctgcacgacatggagctgccgacctccgagctgctcgcccggatggagcgc
gccggcatcgccgccgaccgcgaccacctggaagcgatggagcagcagttcgccggcgcg
gtgcagcaggcggtcaaggaggcgcacgcggcggtcggccacgagttcaacctcggctcg
cccaagcagctccaggaggtcttcttcggtgagctggacctgccgaagacgaagaagacc
aagaccggctacaccacggacgccgacgcgctggcctggctggccacgcagaccgaccac
gaactcccggtgatcatgctccggcaccgggagcaggccaagctgcgtgtcaccgtcgag
ggcctggtcaagaccatcgccgccgacggccgggtgcacaccagcttcagccagaccgtc
gccgcgaccggccggctgtcctccaccgacccgaacctgcagaacgtgccggtgcgcacc
gacgaggggcgggccatccgccgcggcttcgtcgtcggcgagggcttcgagtcgctgatg
acggccgactacagccagatcgagctgcgcgtgatggcccacctctccgaggacgagggc
ctgatcgaggcgttcgcgtccggcgaggacctgcacaccaccgtcgcctcccaggtgttc
ggggtggagcgcgaccaggtcgacgccgagatgcgccgcaagatcaaggccatgtcctac
ggcctggcctacgggctgtccgccttcggcctgtcccagcagctgggcatcgagccggcc
gaggcgcgcggcctgatggagaccttcttcgagcgcttcggcggggtccgcgactacctc
cagcgcgtcgtggacgaggcccgggccaccggatacacggcgacggtcttcggccgccgc
cggtacctgcccgacctcaacagcgacaaccgccagcgccgcgaggccgccgagcggatg
gcgctcaacgccccgatccagggcaccgccgccgacatcgtcaaggtcgcgatgctgcgc
gtcgacaaggcgatcaccgaggccggtctgcgctcgcggatgctgctccaggtccacgac
gaaatcgtgctggagatcgcccccggcgagcgggagcaggtggaggagctggtgcgccgc
gagatgggtgccgccgtcgaactccgtgccccgctggacgtgtcggtgggcgtcggctcc
gactgggagtccgccgcgcactga
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