Streptomyces yangpuensis: NRK68_09350
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Entry
NRK68_09350 CDS
T08585
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03030
DNA replication
syan03430
Mismatch repair
syan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NRK68_09350 (dnaE)
03430 Mismatch repair
NRK68_09350 (dnaE)
03440 Homologous recombination
NRK68_09350 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syan03032
]
NRK68_09350 (dnaE)
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_09350 (dnaE)
Enzymes [BR:
syan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NRK68_09350 (dnaE)
DNA replication proteins [BR:
syan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NRK68_09350 (dnaE)
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NRK68_09350 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UUY47404
LinkDB
All DBs
Position
complement(2024014..2027556)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKTPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GITPIIGIEAYVAPESRRNKRRIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFRL
SSDAYAEGWLTKWPRMDKETISKWSEGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYASEAAAHDALLCI
QTGKNLSDPDRFRFDGSGYYLKSTDEMYAIDSSDAWQEGCANTKLVADQIDTEGMFTFRN
LMPKFDIPDGYTEVTWFREETMRGMHRRFPGGIPEDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPSHPRYSEAGEIRSMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSERITDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLGLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPELEKPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQEGARKNGYSDTAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAGLLTSVKDDKDKSAIYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLTAVRNVGQNVVDSIIKTRKAKGKYSSFPDFLDKVEAVVCNKRTI
ESLIKAGAYDEMGHTRKGLVAHHESMIDNVVAVKRKEAEGQFDLFGGMGDDDGGDEPGFG
LDVEFSDVEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKTDAGISQLTGGEHSDGAV
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGR
LDKREDVPRLVAMEMMVPDLSSAGTNAPVVLTIPTVKVTPPMVTRLGEILRHHKGNTEVR
IKLQGPRTTTVLRLDRHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagacgccgttcacgcacctccacgtccacacccagtactcgctgctggacggt
gccgcacggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcctacgacttcttccacagcgcccagaaggcc
gggatcacgccgatcatcggcatcgaggcctacgtcgcccccgagtcccggcgcaacaag
cgccgcatccagtggggccagccccaccagaagcgcgacgacgtctccggctccggcggt
tacacccacaagacgatctgggcggcgaactccaccggcctgcacaacctcttccggctg
tcctccgacgcgtacgccgagggctggctcacgaagtggccgcgcatggacaaggagacc
atcagcaagtggtccgaggggctgatcgcctccaccggctgcccctccggcgagctgcag
acccggctgcgcctcggccagttcgacgaggccctgaagtcggcctccgaataccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctgctggagatcggcaagaagctcggcatcccgccgctggtgacg
aacgactcccactacacctacgccagcgaggccgccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctcggaccccgaccgcttccgcttcgacggctccggctactac
ctgaagtcgaccgacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacaccaagctggtcgcggaccagatcgacaccgagggcatgttcaccttccggaac
ctgatgccgaagttcgacatcccggacggctacaccgaggtcacctggttccgcgaggag
accatgcgcggcatgcaccgccgcttccccgggggcatccccgaggaccgcatgaagcag
gtcgagtacgagatggacacgatcatctcgatgggcttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtgggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtgaccgagaagtacggggcc
gacaaggtcgccatgatcggcacgtacggcaccatcaaggccaagaacgcgatcaaggac
tccgctcgcgtcctgggctacccgtacgccatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctctccggcatcctcgacccctcgcacccccgc
tacagcgaggccggcgagatccgcagcatgtacgagaacgaacccgacgtgaagaaggtc
atcgacaccgcccgcggtgtcgagggcctggtccgccagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagcggatcaccgaccacgtgcccgtctgggtacggcacaccgac
ggcgtcaccatcacccagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaaggggatcgacatcgacctcctgggcctcccgctcgacgaccccaagaccttcgag
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcctgatgaagcccgacaacttcgaagacatctccgccgtgtcggccctgtac
cgcccgggcccgatgggcatgaactcgcacacgaactacgccctgcgcaagaacaagcag
caggagatcaccccgatccaccccgagctggagaagccgctcgaagaggtgctcgcggtc
acctacggcctcatcgtctaccaggagcaggtccagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggag
ctggccaagaacttcacgatcttccaggagggcgcccggaagaacggctactccgacacc
gccatccaggccctctgggacgtcctggtccccttcgccggctacgccttcaacaaggcc
cactcggccgcgtacggcctggtctcctactggaccgcctacctcaaggcgaactacccg
gccgagtacatggccggcctgctcacctcggtcaaggacgacaaggacaagtccgcgatc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcc
gagtcgaatttcgccgcccagggcgacgacgtgatcctcttcggcctcaccgccgtccgc
aacgtcggccagaacgtcgtcgactcgatcatcaagaccaggaaggccaaggggaagtac
tcctccttccccgacttcctcgacaaggtcgaggccgtcgtctgcaacaagcgcaccatc
gagtcgctgatcaaggccggcgcctacgacgagatgggccacacccgcaagggcctggtc
gcccaccacgagtcgatgatcgacaacgtggtcgccgtcaagcgcaaggaggccgaggga
cagttcgacctcttcggcggcatgggtgacgacgacggcggcgacgagcccggcttcggc
ctcgacgtggagttctccgacgtcgaatgggagaagtcctacctgctcgcccaggaacgc
gagatgctcggcctctacgtctcggaccacccgctcttcggcctggagcacgtgctctcc
gacaagaccgacgccggtatctcccagctcaccggcggcgagcactccgacggcgccgtc
gtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcc
tgggccatcgccaccgtcgaggacctggccggctccatcgagtgcatgttcttccccgcg
acctaccagctcgtctccacccagctggtcgaggacaccgtcgtcttcgtcaagggccgc
ctcgacaagcgcgaggacgtcccacgcctggtcgccatggagatgatggtccccgacctc
tcctcggccggcaccaacgcccccgtcgtcctcaccatccccacggtcaaggtcacgccc
ccgatggtgacccgtctgggcgagatcctgcgccaccacaagggcaacaccgaggtacgg
atcaagctccaggggccgcgcaccaccaccgtgctgcgcctcgaccggcaccgcgtacag
cccgacccggccctcttcggtgacctcaaggtcctcctcggaccgtcctgcctggccgga
taa
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