Streptomyces yangpuensis: NRK68_11535
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Entry
NRK68_11535 CDS
T08585
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03030
DNA replication
syan03430
Mismatch repair
syan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NRK68_11535 (holA)
03430 Mismatch repair
NRK68_11535 (holA)
03440 Homologous recombination
NRK68_11535 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syan03032
]
NRK68_11535 (holA)
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_11535 (holA)
Enzymes [BR:
syan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NRK68_11535 (holA)
DNA replication proteins [BR:
syan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NRK68_11535 (holA)
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NRK68_11535 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UUY47798
UniProt:
A0ABY5PVZ0
LinkDB
All DBs
Position
complement(2501578..2502570)
Genome browser
AA seq
330 aa
AA seq
DB search
MATRKNSTDDPLAPITLAVGQEELLLDRAVREVVAAARAADADTDVRDLTSDQLQPGTLA
ELVSPSLFSERKVLVVRNAQDLSADTVKEVKAYLAAPYEEIALVLLHAGGVKGKGLLDAA
RKAGAREIACPKMTKAADRLAFVRGEFRTLGRSATPEACQTLVDAIGSDLRELASAAAQL
CADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLATGVAPVLITSA
LAQAVRAIGKLASAPRGARPGDLARDLGMPPWKIDRVRQQMRGWSADGVADALRAVAAAD
AGVKGGGDDPEYALEKAVVAVARAARPQRR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggaagaattccaccgacgatccgcttgccccgatcaccctcgcggtgggg
caggaggagctgctgctcgaccgcgccgtgcgggaggtggtggcggccgcgcgtgccgcc
gacgccgacaccgacgtccgcgacctcacctccgaccagctccagcccggcaccctcgcc
gagctggtgagcccttcgctcttctccgagcgcaaggtgctcgtcgtgcgcaacgcgcag
gacctgtccgccgacacggtcaaggaggtcaaggcctacctcgccgctccctacgaggag
atcgcgctggtcctcctccacgcgggcggcgtcaagggcaagggcctgctggacgcggcg
cgcaaggcgggagcccgggagatcgcctgcccgaagatgacgaaggcggcggaccggctc
gcgttcgtacggggcgagttccgcacgctgggccggtcggcgaccccggaggcgtgccag
accctggtcgacgcgatcggcagcgacctgcgggagctggcgagtgccgcggcgcagctg
tgcgcggacgtcgagggaaccatcgacgaggccgtcgtcggccgctactacacgggccgg
gccgaggcctccagcttcacggtcgccgaccgggcggtcgaggggcgtgcggcggaggcc
ctggaggccttgcgctggtccctggccaccggggtggcgccggtcctgatcaccagtgct
ctggcacaggcggtccgggcgatcggcaagctggcctccgccccgcgcggcgcccggccc
ggggacctcgcccgggacctcggtatgcctccgtggaagatcgaccgggtccgccagcag
atgcggggctggtcggcggacggcgtcgcggacgcgctgcgcgcggtggccgccgccgac
gcgggggtcaagggcgggggtgacgatcccgagtacgcgctggagaaggcggtcgtcgcg
gtcgcccgcgccgcccgcccccagcgccgctga
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