Streptomyces yangpuensis: NRK68_12220
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Entry
NRK68_12220 CDS
T08585
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NRK68_12220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_12220
Enzymes [BR:
syan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NRK68_12220
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NRK68_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
PIF1
NAT10_TcmA_helicase
PhoH
NPHP3_N
AAA_16
nSTAND3
UvrD-helicase
DEAD
AAA
HTH_IclR
DUF87
TrwB_AAD_bind
SLFN-g3_helicase
UvrD_C
ABC_tran
ATPase_2
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UUY47919
UniProt:
A0ABY5PVA1
LinkDB
All DBs
Position
complement(2673765..2676020)
Genome browser
AA seq
751 aa
AA seq
DB search
MATDGVRAAVQLAVVEGVLERITYANEESGYTVARVDTGRGSGDLLTVVGSLLGAQPGES
LRMEGRWGSHPQYGRQFTVENYRTVLPATIQGIRRYLGSGLIKGIGPRIADRIVEHFGTD
TLDVIEAEPKRLVEVPGLGPKRTKLIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKY
GDASISVVNNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGH
CFLPEEKLIADGVKLLQVDTGLVIECLAELAADPEGVVREAVPDPQGGPDPLTAVYLVPF
HRAELSLVGQVRRLLNAEDDRMPSFQDVDWDRALGWLAGRTGAELAPEQRDAVRLALTRK
VAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLEL
KPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAG
EVLRDLLAEGGPVPAVRLTRIFRQAQQSGVVTNAHRINTGLPPITDGLPDFFLFPEEDTE
AAGVLAVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGNLNGLLQQAMTPARPDLPEK
RFGGRVFRVGDKVTQIRNNYEKGANGVFNGTVGVVIGLDADEQRLTVRTEEDEEIVYEFG
ELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRKA
LGQAVRTVSAGRRYTAVAPRLSGRIPVGNIT
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggacggggtacgagcggcggtgcaactggcggtggtcgagggcgtgctcgaa
cgcatcacctacgccaacgaggagagcggctacacggtcgcccgcgtcgacaccggccgc
ggcagcggcgacctgctcaccgtggtcggctcgctgctgggggcgcagcccggcgaatcg
ctgcgcatggagggccgttggggctcccacccgcagtacggcaggcagttcaccgtggag
aactaccgcaccgtcctgcccgcgaccatccagggcatccggcggtatctcggctccggt
ctgatcaagggcatcgggccgaggatcgccgaccggatcgtggagcacttcggcaccgac
accctcgacgtgatcgaggccgagccgaagcggctggtcgaggtgccggggctcggcccc
aagcggacgaagctgatcggggccgcctgggaggagcagaaggccatcaaggaggtcatg
gtcttcctccagggcgtcggtgtctccacctccatcgcggtgcgcatctacaagaagtac
ggcgacgcctccatctccgtcgtcaacaaccagccctaccggctcgcggccgacgtgtgg
ggcatcggcttcctgaccgccgaccgcatcgcccaggccgtcgggatcccgcacgacagc
cccgagcgggtcaaggccggactgcagtacgccctgtcccagtccaccgaccagggccac
tgcttcctgcccgaggagaagctcatcgccgacggggtcaaactgctccaggtggacacc
gggctggtgatcgagtgcctggccgagctcgccgccgacccggaaggtgtcgtacgggag
gccgtgcccgatccgcagggcgggcccgacccgctgaccgccgtgtacctggtgcccttc
caccgggccgagctgtcgctggtcgggcaggtgcgccggctcctgaacgccgaggacgac
cgaatgccctccttccaggacgtggactgggaccgggcgctgggctggctcgccgggcgt
acgggggccgagctcgcccccgagcagcgggacgcggtcaggctggcgctgacccgcaag
gtcgccgtcctcacgggcggccccggctgcggcaaatccttcaccgtgcgctccatcgtc
gagctggcccgggccaagaaggccaaggtggtgctggccgcgcccaccggccgggcggcg
aagcggctctcggagctcaccggggccgaggcctccacggtgcaccggctgctggagctc
aagccgggcggggacgccgcgtacgaccgggaccggccgctggacgccgacctggtcgtg
gtcgacgaggcctcgatgctggacctgctgctggccaacaagctggtcaaggcggtggcg
cccggtgcccacctgctgctcgtgggggatgtggaccagctgccctcggtcggcgccggg
gaggtgctgcgggacctgctggcggagggcggcccggtgcccgcggtgcgcctgacccgg
atcttccggcaggcccagcagtccggtgtggtcaccaacgcgcaccggatcaacaccggg
ctgccgccgatcaccgacggactgccggacttcttcctcttccccgaggaggacaccgag
gcggcgggcgtgctggccgtggacgtggcggcccgcaggatcccggcccggttcggcctc
gacccgcggcgggacgtccaggtgctcgcccccatgcaccgcggcccggcgggcgccggg
aacctcaacgggctgctccagcaggcgatgacgccggcccggccggacctgccggagaag
cggttcggcggccgggtcttccgggtgggcgacaaggtcacccagatccgcaacaactac
gagaagggggccaacggcgtcttcaacggcacggtcggcgtcgtcatcggcctggacgcc
gacgaacagcgcctgacggtgcggacggaggaggacgaggagatcgtgtacgaattcggt
gagctcgacgagctggcccacgcgtacgccgtcaccatccaccgctcccaggggagtgaa
tatcccgctgtggtgatcccggtcaccaccggcgcttggatgatgctccagcgaaatctg
ctctacacggccgtcaccagggcgaagaaactggtcgtcctcgtcgggtcccggaaggcc
ctcggccaggcggtgcgtaccgtttccgcaggcaggaggtacacggcggtcgcgccgaga
ctctccggacggataccggtgggaaacatcacctag
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