Streptomyces yangpuensis: NRK68_18640
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Entry
NRK68_18640 CDS
T08585
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan00550
Peptidoglycan biosynthesis
syan01100
Metabolic pathways
syan01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NRK68_18640 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NRK68_18640 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syan01011
]
NRK68_18640 (mrdA)
Enzymes [BR:
syan01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NRK68_18640 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
syan01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NRK68_18640 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
S5p_N
Motif
Other DBs
NCBI-ProteinID:
UUY49044
LinkDB
All DBs
Position
4080827..4082914
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AA seq
695 aa
AA seq
DB search
MSNIPETGRTPRVQNRLVVIQVVVFSLLLTLGGRLWYLQIRNGQDYTDEAKNNHVQQVVQ
PAVRGSILDSRGVPLADNATHLVVSASRTELLTMKDKGRSVLIRLAGVLGMDPQEVVDKV
RLCDSKTKQPCWNGSPYQPIPVSDEATTEQALQIREHPEDFPGITAEATALRRYAAPDQA
NTSQVLGYLSPVTDEEIAKAKKTDSPYLRSDQVGRSGLERTYDKELRGKAGITRYEVDNL
GRVIGQGQTDPAQPGSNIVTSIDSRVQAVAERELNNAMIEARKVRDRNTNRNYEADSGAV
VVMETKTGRIVAMASNPTYDPNTWVGGISAKDYASLTDKESNYPLLNRAIQGQAAPGSIF
KVVTSTAAVNAGYPFNNRYPCPSSYSVGSQTFTNFESQGYGDITIGRALEVSCDTVYYLI
ADQEWKKDGGIKPKKDPNDWFLKTAHEFGLGKRTGIDLPNEVPGRVPDRKWKQDFFDANK
DAWCRDGKKNGSFAEKIAYENCRQGNQLREGDAINYSIGQGDTLVTPVQMASVYAAIANG
GTLHQPSVGKAVVSADGTSVKEIAPKERGKLPMDKKTRDNIDAALAGVATDGSAAWRFGG
WPQKQIPMHAKTGTAEVQGKQTTSWFASYTEDYAIVMTISQGGTGSGASGPAVRKIYEAM
YGLDPTGKQDLTKALLPTPATALPAIRPDGEVSPN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaacataccggagaccggccggacccctcgggtccagaaccggctcgtcgtcatc
caggtcgtggtcttctccctgctgctcacgctgggcggacggctctggtacctccagatc
cgcaacggccaggactacacggacgaggcgaagaacaaccacgtccagcaggtggtccag
ccggccgtgcgcggctcgatcctcgactcgcgcggggtcccgctcgccgacaacgcgacc
cacctggtggtgtccgccagccgtaccgagctgctgacgatgaaggacaagggcaggtcc
gtcctgatccggctcgccggggtcctgggcatggacccccaggaggtcgtcgacaaggtc
cgcctctgcgactccaagaccaagcagccctgctggaacggctccccctaccagccgatc
ccggtcagcgacgaggccaccaccgagcaggcgctgcagatccgtgagcaccccgaggac
ttccccggcatcacggccgaggccaccgcgctgcgccgctacgcggccccggaccaggcc
aacacctcccaggtgctgggctacctctccccggtcaccgacgaggagatcgcgaaggcg
aagaagaccgactccccctacctgcgctccgaccaggtgggccgctccggcctggagcgc
acctacgacaaggagctgcgcggcaaggccggcatcacccgctacgaggtggacaacctc
ggccgtgtcatcgggcaggggcagaccgacccggcgcagcccggctcgaacatcgtgacc
tcgatcgactcgcgcgtgcaggcggtggccgagcgcgagctgaacaacgcgatgatcgaa
gcgcgcaaggtcagggacaggaacaccaaccgcaactacgaggccgactcgggcgcggtc
gtggtgatggagaccaagacgggccggatcgtcgcgatggcctcgaaccccacctacgat
cccaacacctgggtgggcggcatctccgcgaaggactacgcctccctcaccgacaaggag
tccaactaccccctgctgaatcgggcgatccaggggcaggcggcgccgggctccatcttc
aaggtggtcacctcgaccgccgcggtcaacgccggctaccccttcaacaaccgctacccc
tgccccagctcgtactcggtgggcagtcagaccttcacgaacttcgagtcgcagggctac
ggcgacatcaccatcggccgggccctggaggtctcctgcgacaccgtctactacctgatc
gcggaccaggagtggaagaaggacgggggcatcaagcccaagaaggaccccaacgactgg
ttcctcaagacggcccacgagttcggtctgggcaagcgcaccggcatcgacctgcccaac
gaggtgcccggccgggtccccgaccgcaagtggaagcaggacttcttcgacgccaacaag
gacgcctggtgccgggacggcaagaagaacggcagcttcgccgagaagatcgcctacgag
aactgccgccagggcaaccagctgcgcgagggtgacgcgatcaactactcgatcgggcag
ggcgacaccctcgtcaccccggtccagatggcgtccgtctacgcggccatcgccaacggc
ggcaccctgcaccagccgagcgtcggcaaggcggtcgtcagcgccgacgggacgtcggtg
aaggagatcgcccccaaggagcgggggaagctcccgatggacaagaagacccgcgacaac
atcgacgcggccctcgcgggcgtggccaccgacggcagcgccgcctggcgcttcggcggc
tggccgcagaagcagatccccatgcacgccaagaccggcacggccgaggtccagggcaag
cagaccacctcgtggttcgcctcgtacaccgaggactacgcgatcgtcatgacgatctcc
cagggcggtaccggctccggggcctccggaccggccgtccgcaagatctacgaggcgatg
tacgggctcgacccgacgggcaagcaggacctcaccaaggccctgctgcccacgcccgcc
acggcgctgcccgcgatccggccggacggggaggtctcccccaactga
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