Streptomyces yangpuensis: NRK68_20315
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Entry
NRK68_20315 CDS
T08585
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NRK68_20315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syan03021
]
NRK68_20315
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_20315
Enzymes [BR:
syan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NRK68_20315
Transcription machinery [BR:
syan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NRK68_20315
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NRK68_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UUY49349
LinkDB
All DBs
Position
4416628..4417650
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDIILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQLGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccgtcgctgaccgaagaggtcgttgacgagtaccgctcgcgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgccgt
accctcctgtcctccatcccgggtgccgctgtcaccagcatccgcgtggacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaagacgtcacggacatcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgctgccgacatcgcgcccccggccggtgtcgaggtgcacaac
ccggacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcagctgggccaggagatcggc
cgcatcccggtcgactccatctacagcccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggtaagaccctggtcgagttgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgct
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tga
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