Streptomyces yangpuensis: NRK68_20880
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Entry
NRK68_20880 CDS
T08585
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan00020
Citrate cycle (TCA cycle)
syan00190
Oxidative phosphorylation
syan00650
Butanoate metabolism
syan00720
Other carbon fixation pathways
syan01100
Metabolic pathways
syan01110
Biosynthesis of secondary metabolites
syan01120
Microbial metabolism in diverse environments
syan01200
Carbon metabolism
Module
syan_M00009
Citrate cycle (TCA cycle, Krebs cycle)
syan_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
syan_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NRK68_20880 (sdhA)
00650 Butanoate metabolism
NRK68_20880 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NRK68_20880 (sdhA)
00720 Other carbon fixation pathways
NRK68_20880 (sdhA)
Enzymes [BR:
syan01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NRK68_20880 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
DUF1978
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UUY49453
UniProt:
A0ABY5Q0C6
LinkDB
All DBs
Position
complement(4540127..4541881)
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AA seq
584 aa
AA seq
DB search
MKIHKYDTVIVGAGGAGMRAAIESTKRSRTAVLTKLYPTRSHTGAAQGGMAAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVLDLEKMGLPFNRTPDGTIDQRRFGGHS
RNHGEAPVRRSCYAADRTGHMILQTLYQNCVKEGVEFFNEFYVLDQLLVEEDGVKKSAGV
VAYELATGEIHVFQAKAVIYASGGTGKFFKVTSNAHTLTGDGQAACYRRGLPLEDMEFFQ
FHPTGIWRMGILLTEGARGEGGILRNKDGERFMEKYAPVMKDLASRDVVSRSIYTEIREG
RGCGPAGDHVYLDLTHLPPEQLDAKLPDITEFARTYLGIEPYTDPIPIQPTAHYAMGGIP
TNVEGEVLSDNTTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGKRSGIAAAKYSQE
NDFVELPENPAQQVSDLVERLRNSTGKERVADLRLELQETMDANVMVFRTEQTIKTAVEK
IAELRERYKNVSVQDKGKRFNTDLLEAIELGNLLDLAEVMAVSALARKESRGGHYREDYP
NRDDVNFMRHTMAYREVGADGSDSVRLDYKPVVTTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccacaagtacgacaccgtcatcgtcggcgccggtggcgccggcatgcgcgcc
gccatcgagtcgacgaagcgcagccgcaccgcggtgctgacgaagctctaccccacccgt
tcccacacgggcgcggcgcagggcggcatggccgccgcgctggcgaacgtggaggaggac
aactgggagtggcacaccttcgacacggtcaagggcggtgactacctggtcgaccaggac
gccgccgagatcctggcgaaggaggccatcgacgcggtcctcgacctggagaagatgggc
ctgccgttcaaccgcaccccggacggcaccatcgaccagcgccgcttcggcggtcactcc
cgcaaccacggcgaggcgccggtccgccggtcctgctacgccgcggaccgcaccggtcac
atgatcctccagacgctgtaccagaactgcgtcaaggagggcgtggagttcttcaacgag
ttctacgtcctggaccagctcctggtcgaggaggacggcgtcaagaagtcggccggtgtg
gtcgcgtacgagctcgccaccggcgagatccacgtgttccaggccaaggccgtcatctac
gcctccggcggcaccggcaagttcttcaaggtgacctccaacgcgcacaccctcacgggt
gacggccaggcggcctgctaccgccgcggcctgccgctggaggacatggagttcttccag
ttccacccgacgggcatctggcgcatgggcatcctgctgacggagggcgcccgcggtgag
ggcggcatcctccgcaacaaggacggcgagcgcttcatggagaagtacgcgccggtcatg
aaggacctcgcgtcccgtgacgtcgtctcgcgctccatctacaccgagatccgtgagggc
cgcggctgcggtccggccggtgaccacgtgtacctggacctcacccacctgccgccggag
cagctcgacgcgaagctcccggacatcaccgagttcgcgcgcacctacctgggcatcgag
ccgtacacggacccgatcccgatccagcccaccgcgcactacgccatgggcggcatcccg
accaacgtcgagggtgaggtcctgtcggacaacaccaccgtcgtcccgggcctgtacgcg
gccggcgaggtcgcctgcgtgtcggtgcacggcgcgaaccgcctgggcaccaactcgctg
ctggacatcaacgtcttcggcaagcgctccggcatcgccgcggccaagtactcgcaggag
aacgacttcgtcgagctccccgagaacccggcgcagcaggtgtcggacctcgtcgagcgc
ctgcgcaactccacgggcaaggagcgggtcgccgacctgcgtctggagctccaggagacg
atggacgcgaacgtgatggtcttccgtacggagcagaccatcaagaccgcggtcgagaag
atcgcggagctgcgcgagcgctacaagaacgtgtccgtccaggacaagggcaagcgcttc
aacacggacctgctggaggccatcgagctgggcaacctgctcgacctggccgaggtcatg
gccgtgtccgccctggcgcgcaaggagtcccgcggtggtcactaccgcgaggactacccc
aaccgcgacgacgtcaacttcatgcgccacaccatggcgtaccgcgaggtcggagccgac
ggctcggactcggtccggctcgactacaagccggtcgtgacgacccgctaccagccgatg
gagcgtaagtactga
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