Streptomyces yangpuensis: NRK68_22545
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Entry
NRK68_22545 CDS
T08585
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03420
Nucleotide excision repair
syan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NRK68_22545
03430 Mismatch repair
NRK68_22545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syan03400
]
NRK68_22545
Enzymes [BR:
syan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NRK68_22545
DNA repair and recombination proteins [BR:
syan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NRK68_22545
MMR (mismatch excision repair)
Other MMR factors
NRK68_22545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
UUY49760
LinkDB
All DBs
Position
4889874..4892036
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AA seq
720 aa
AA seq
DB search
MTAATHSSSFSAAADSADAVLLGLDPEQREVATTLRGPVCVLAGAGTGKTRAITHRIAYG
VRTGQLMPASVLAVTFTNRAAGEMRGRLRSLGAEGVQARTFHSAALRQLQYFWPRAVGGE
VPRLLERKIQFVAEAGARCRIRLDRGELRDVTGEIEWAKVTQTVPADYPAAARKAGREAP
RDMAEIAQIYGTYEQLKRDRGMIDFEDVLLLTVGILQDRHDIAEQIRAQYQHFVVDEYQD
VSPLQQRLLELWLGERDSLCVVGDASQTIYSFTGATPDHLLNFRTRYPQASVVKLVRDYR
STPQVVHLANGLLNQAKGRAAEHRLELVSQREGGPDPVYAEYADEPAEAEGVARRIRDLI
AAGVPAGEIAVLFRINAQSEVYEQALADAGVPYQLRGAERFFERQEVQKALLALRGTARS
GGNDPLLEDLVGLGSQVRAVLSSIGWTTEPPAGSGAVRDQWESVAALVRLAEDFARGRPA
ATLADLVVELDERKAAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLTDGMLPITYAKTDD
QVEEERRLLYVGVTRARLHLTLSWALSRAPGGRASRRPSRFLNGLRPGSAAPSRPGSAGE
RVARPRRRRGPALCRVCGRTLTEAGELKLMRCEDCPSDMDAGLYERLREWRAAQADRQGL
PAYCVFTDKTLTAIAEASPSEAEELSMISGVGRRKFDRYGADVLAICAGQEPGGEDPDDA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactcctcctccttctccgccgccgcagactcggccgacgcggtg
ctcctgggcctcgacccggagcagcgcgaggtcgcgacgaccctgcgcggaccggtgtgc
gtgctggccggcgccggtacgggcaagacccgggcgatcacccaccgcatcgcctacggc
gtccggaccgggcagctcatgccggccagcgtgctcgccgtcaccttcaccaaccgggcc
gccggcgagatgcgcggccggctgcgctcgctcggcgcggaaggggtccaggcccggacc
ttccactccgccgccctgcgccagctccagtacttctggccccgggccgtcggcggggag
gtgccccggctgctggaacgcaagatccagttcgtcgcggaggccggcgcgcgctgccgc
atccgtctcgaccgcggggagctgcgcgacgtcaccggtgagatcgagtgggccaaggtc
acccagacggtgcccgccgactatccggcggccgctcgcaaggcgggccgcgaggccccg
cgggacatggccgagatcgcccagatctacgggacgtacgagcagctcaagcgcgaccgc
ggaatgatcgacttcgaggacgtgctgctcctgaccgtcggcatcctccaggaccgccac
gacatcgccgagcagatccgcgcccagtaccagcacttcgtcgtcgacgagtaccaggac
gtcagcccgctccagcagcggctgctggagctgtggctcggtgagcgcgacagcctctgc
gtcgtcggtgacgccagccagaccatctactccttcaccggcgccacccccgaccacctg
ctgaacttccgcacgcgctacccgcaggccagcgtggtcaagctggtccgcgactaccgc
tccacgccccaggtggtgcacctcgccaacgggctcctgaaccaggccaaggggcgggcc
gccgagcaccgtctcgagctcgtctcccagcgtgagggcggccccgacccggtctacgcc
gagtacgcggacgagcccgccgaggccgagggggtcgcccgccggatccgtgacctgatc
gccgcgggcgtccccgccggtgagatcgccgtgctcttccgcatcaacgcccagtccgag
gtctacgagcaggccctcgccgacgccggggttccgtatcagctccgcggggccgagcgg
ttcttcgagcgccaggaggtccagaaggccctcctcgcgctgcgcggaacggcccgttcc
ggcgggaacgacccgctgctcgaggacctcgtcggcctgggctcccaggtccgggcggtg
ctcagctccatcggctggaccaccgagccgcccgccggctccggcgccgtgcgcgaccag
tgggaatcggtggccgcgctcgtccggctcgccgaggacttcgcccgcggccggcccgcg
gccaccctggcggacctcgtggtcgagctggacgagcgcaaggcggcccagcacgccccg
accgtccagggggtcaccctggcctcgctgcacgcggcgaagggcctggagtgggacgcc
gtcttcctcgtcggcctcaccgacggcatgctgccgatcacctacgccaagaccgacgac
caggtcgaggaggagcggcggctgctctacgtgggcgtcacccgggcccggctgcacctg
acgctctcctgggccctctcccgcgcccccgggggaagggcctcccggcgccccagccgc
ttcctgaacggcctgcgaccgggctccgccgccccgagccggcccggctccgcgggcgag
cgggtggcgcggccgcgccgccgccgcggcccggcgctgtgccgggtctgcggcaggacg
ctgaccgaggccggcgagctgaagctgatgcgctgcgaggactgcccctccgacatggac
gcgggtctctacgagcggctgcgggagtggcgtgccgcacaggcggatcggcagggcctg
cccgcctactgcgtcttcacggacaagaccttgacggcgatcgcggaggcctcgccctcc
gaggccgaggagctctcgatgatctccggggtgggccggcgcaagttcgaccggtacgga
gccgatgtgctggccatctgtgcaggtcaggagcctgggggcgaggatcctgacgacgcg
tag
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