Streptomyces yangpuensis: NRK68_23430
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Entry
NRK68_23430 CDS
T08585
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
syan
Streptomyces yangpuensis
Pathway
syan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRK68_23430 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syan03021
]
NRK68_23430 (rho)
03019 Messenger RNA biogenesis [BR:
syan03019
]
NRK68_23430 (rho)
Transcription machinery [BR:
syan03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NRK68_23430 (rho)
Messenger RNA biogenesis [BR:
syan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NRK68_23430 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
NACHT
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
UUY49920
UniProt:
A0ABY5Q0X0
LinkDB
All DBs
Position
5076823..5078901
Genome browser
AA seq
692 aa
AA seq
DB search
MSDTTDLMGAADTSVDTSAPAAGAAPKRRRTGTGLDGMVLAELQQVASGLGIRGTARMRK
SQLIEVIKEAQAGSGAPKAAASAADTAEAKPKRRATSKARTAAADAAPAEAPAAPAEKPA
VAAQAQIEIPGQPASDDAPAGERRRRRATAPSGSPEGSAPVSVQVEQKADTATATAPAET
KAEAATAVSAGQAQGQDGEGRGRRDRRERGDRQRDRRERGAKADDQGQGGQGQGQPAQGG
QGGGRQDRADRQDRQQQGGRGQGQGQQGRQDGGPQDDFDDEGGRRGRRGRYRDRRGRRGR
DEFAPNEPQVADDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKAGLRKGD
HTTGAVRQPKDGERREKFNALVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRLETDPG
VLTTRIIDLVSPIGKGQRGLIVAPPKTGKTMIMQAIANAITTNNPECHLMVVLVDERPEE
VTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYN
LAAPASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEEF
KGTGNMELKLDRKLADKRIFPAVDVDPSGTRKEEILLNAEELAIVWKLRRVLHALDSQQA
IELLLDKMKQTKSNAEFLMQIAKTTPSGKNDD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgctgccgacacctctgtcgacaccagtgctccc
gccgcgggcgccgcgcccaagcgtcgtcgcaccggcaccggccttgacggcatggtcctc
gccgagctgcagcaggtcgcgtcgggcctcggtatcaggggcaccgcgcggatgcgcaag
agccagctgatcgaggtcatcaaggaggcgcaggcgggcagcggtgcccccaaggccgcc
gcctccgccgcggacaccgccgaggccaagccgaagcgccgcgccaccagcaaggcccgt
acggccgccgccgacgccgcaccggcggaggcccccgcggcccccgccgagaagcccgcc
gtcgccgcgcaggcgcagatcgagatcccgggccagcccgccagcgacgacgcgccggcc
ggcgagcgtcgccgccgccgtgccacggccccctccggcagcccggagggctcggccccc
gtctccgtacaggtcgagcagaaggccgacacggccaccgccaccgcgcccgccgagacc
aaggcggaggccgccaccgcggtctccgcgggccaggcccagggccaggacggcgagggc
cgcggccgccgcgaccgtcgtgagcgcggcgaccgccagcgcgaccgccgtgagcgcggc
gccaaggccgacgaccagggccagggcggccagggtcagggccagcccgcgcagggcggc
cagggcggcggccggcaggaccgcgccgaccgtcaggaccgccagcagcagggcggccgc
ggtcagggccagggccagcagggccgccaggacggcggcccgcaggacgacttcgacgac
gagggcggccgccgtggccgtcgcggccgctaccgcgaccgccgtggccgtcgcggccgc
gacgagttcgcgccgaacgagccgcaggtcgccgacgacgacgtgctgatccccgtcgcg
ggcatcctcgacatcctcgacaactacgcgttcatccggacctcgggctacctgcccggc
cccaacgacgtgtacgtctccctcgcccaggtacgcaaggcgggtctgcgcaagggcgac
cacaccacgggtgccgtgcgccagcccaaggacggcgagcgccgcgagaagttcaacgcc
ctggtgcgcctcgactcggtgaacggcatggcgcccgaatccggccgcggccgaccggag
ttccagaagctgacgcccctgtacccgcaggaccggctgcgcctggagaccgacccgggc
gtgctgaccacccgcatcatcgacctcgtgtcgccgatcggtaagggccagcgcggtctg
atcgtggccccgccgaagaccggcaagaccatgatcatgcaggcgatcgccaacgcgatc
accaccaacaaccccgagtgccacctgatggtcgtcctggtcgacgagcgtccggaagag
gtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgaccgcccg
gccgaggaccacaccactgtcgccgagctggccatcgagcgcgccaagcgtctcgtcgag
ctgggtcacgacgtggtcgtcctgctggactccatcacccgtctgggccgcgcgtacaac
ctcgcggcgcccgcctccggccgcatcctgtccggtggtgtcgactcgaccgcgctgtac
ccgccgaagcgcttcttcggtgccgcgcgcaacatcgaggacggcggctcgctgaccatc
ctggccaccgcgctggtcgacaccggctcgcgcatggacgaggtgatcttcgaggagttc
aagggcaccggcaacatggagctcaagctcgaccggaagctcgccgacaagcgcatcttc
ccggccgtcgacgtggacccgtcgggcacccgcaaggaggagatcctcctcaacgcggag
gagctcgccatcgtctggaagctgcgccgggtgctgcacgcgctcgactcgcagcaggcg
atcgaactgctcctcgacaagatgaagcagacgaagtcgaacgccgagttcctgatgcag
atcgcgaagacgaccccgtcgggcaagaacgacgactga
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