Streptomyces yangpuensis: NRK68_25205
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Entry
NRK68_25205 CDS
T08585
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
syan
Streptomyces yangpuensis
Pathway
syan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRK68_25205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syan03019
]
NRK68_25205
03016 Transfer RNA biogenesis [BR:
syan03016
]
NRK68_25205
Enzymes [BR:
syan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NRK68_25205
Messenger RNA biogenesis [BR:
syan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NRK68_25205
Transfer RNA biogenesis [BR:
syan03016
]
Prokaryotic type
tRNA degradation factors
NRK68_25205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UUY52145
UniProt:
A0ABY5Q923
LinkDB
All DBs
Position
5479507..5481729
Genome browser
AA seq
740 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATVMALNPDHLYDVIAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRTLEDGDVAIMMVEAEATEKTIALVKGGAEAPTEEIVAAGLEAAKPFIKVLC
KAQADLAAKAAKPEGEFPVFLDYQDDVYEALAAAVKGELSQALTIAGKQDREAELDRVKE
IAAEKLLPAFEGREKEISAAYRSLTKALVRERVIKDKVRIDGRGITDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGTKVQVEIAEIDQRGKLSL
IPVIEGEDAADEADKDDSDK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcattgacaacggctccttcggcacccgc
accatccgcttcgagacgggccgtctggcccgccaggccgccggctccgccgttgcctac
ctggacgacgacacgatggtgctgtccgccaccaccgcgtcgaagaagcccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggcagtacgcggccggcaagatc
cccggctccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccaccgtcatggcgctcaacccggaccacctgtacgacgtcatcgcgatcaacgcc
gcgtccgcgtccacccagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcaccctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatcgccctcgtcaagggcggcgccgaggcgccg
accgaggagatcgtcgccgcgggcctcgaggccgcgaagccgttcatcaaggtcctctgc
aaggcccaggccgacctggccgccaaggccgccaagcccgagggtgagttcccggtcttc
ctggactaccaggacgacgtgtacgaggccctcgcggccgccgtcaagggcgagctctcc
caggcgctgaccatcgcgggcaagcaggaccgcgaggccgagctggaccgcgtcaaggag
atcgccgccgagaagctcctcccggccttcgaaggccgggagaaggagatctccgccgcg
taccgcagcctgaccaaggccctggtccgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgcgggatcacggacatccgtaccctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctcttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgatcgtgccggtcctgccg
acccgcgaggagttcccctacgcgatccgccaggtgtccgaggccctcggctccaacggt
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtcaccgcgctccagctggacaccaagctcgac
ggcatcccggcctccgtcctggccgccgccctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgccttcgtctccctgctccccggcaaggacggcctcctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcgcg
gtcggcaccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgagggcgaggacgccgccgacgaggctgacaaggacgactccgacaag
tga
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